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synto_env.yml
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synto_env.yml
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name: syntool_env
channels:
- pytorch
- pyg
- nvidia
- conda-forge
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_kmp_llvm
- annotated-types=0.6.0=pyhd8ed1ab_0
- anyio=3.7.1=pyhd8ed1ab_0
- appdirs=1.4.4=pyh9f0ad1d_0
- arrow=1.3.0=pyhd8ed1ab_0
- backoff=2.2.1=pyhd8ed1ab_0
- beautifulsoup4=4.12.2=pyha770c72_0
- blas=2.116=mkl
- blas-devel=3.9.0=16_linux64_mkl
- blessed=1.19.1=pyhe4f9e05_2
- brotli-python=1.1.0=py311hb755f60_1
- bzip2=1.0.8=hd590300_5
- ca-certificates=2023.11.17=hbcca054_0
- cachecontrol=0.13.1=pyhd8ed1ab_0
- cachecontrol-with-filecache=0.13.1=pyhd8ed1ab_0
- cachy=0.3.0=pyhd8ed1ab_1
- certifi=2023.11.17=pyhd8ed1ab_0
- cffi=1.16.0=py311hb3a22ac_0
- charset-normalizer=3.3.2=pyhd8ed1ab_0
- cleo=2.1.0=pyhd8ed1ab_0
- click=8.1.7=unix_pyh707e725_0
- click-default-group=1.2.4=pyhd8ed1ab_0
- clikit=0.6.2=pyhd8ed1ab_2
- colorama=0.4.6=pyhd8ed1ab_0
- conda-lock=2.5.1=pyhd8ed1ab_0
- crashtest=0.4.1=pyhd8ed1ab_0
- croniter=1.4.1=pyhd8ed1ab_0
- cryptography=41.0.7=py311hcb13ee4_1
- cuda-cudart=11.8.89=0
- cuda-cupti=11.8.87=0
- cuda-libraries=11.8.0=0
- cuda-nvrtc=11.8.89=0
- cuda-nvtx=11.8.86=0
- cuda-runtime=11.8.0=0
- dateutils=0.6.12=py_0
- dbus=1.13.6=h5008d03_3
- deepdiff=6.7.1=pyhd8ed1ab_0
- distlib=0.3.7=pyhd8ed1ab_0
- dulwich=0.21.7=py311h459d7ec_0
- ensureconda=1.4.3=pyhd8ed1ab_0
- exceptiongroup=1.2.0=pyhd8ed1ab_0
- expat=2.5.0=hcb278e6_1
- fastapi=0.104.1=pyhd8ed1ab_0
- filelock=3.13.1=pyhd8ed1ab_0
- fsspec=2023.12.1=pyhca7485f_0
- gdown=4.7.1=pyhd8ed1ab_0
- gettext=0.21.1=h27087fc_0
- gitdb=4.0.11=pyhd8ed1ab_0
- gitpython=3.1.40=pyhd8ed1ab_0
- gmp=6.3.0=h59595ed_0
- gmpy2=2.1.2=py311h6a5fa03_1
- h11=0.14.0=pyhd8ed1ab_0
- html5lib=1.1=pyh9f0ad1d_0
- icu=73.2=h59595ed_0
- idna=3.6=pyhd8ed1ab_0
- importlib-metadata=7.0.0=pyha770c72_0
- importlib_metadata=7.0.0=hd8ed1ab_0
- inquirer=3.1.4=pyhd8ed1ab_0
- itsdangerous=2.1.2=pyhd8ed1ab_0
- jaraco.classes=3.3.0=pyhd8ed1ab_0
- jeepney=0.8.0=pyhd8ed1ab_0
- jinja2=3.1.2=pyhd8ed1ab_1
- joblib=1.3.2=pyhd8ed1ab_0
- keyring=24.3.0=py311h38be061_0
- ld_impl_linux-64=2.40=h41732ed_0
- libblas=3.9.0=16_linux64_mkl
- libcblas=3.9.0=16_linux64_mkl
- libcublas=11.11.3.6=0
- libcufft=10.9.0.58=0
- libcufile=1.8.1.2=0
- libcurand=10.3.4.101=0
- libcusolver=11.4.1.48=0
- libcusparse=11.7.5.86=0
- libexpat=2.5.0=hcb278e6_1
- libffi=3.4.2=h7f98852_5
- libgcc-ng=13.2.0=h807b86a_3
- libgfortran-ng=13.2.0=h69a702a_3
- libgfortran5=13.2.0=ha4646dd_3
- libglib=2.78.2=h783c2da_0
- libhwloc=2.9.3=default_h554bfaf_1009
- libiconv=1.17=h166bdaf_0
- liblapack=3.9.0=16_linux64_mkl
- liblapacke=3.9.0=16_linux64_mkl
- libnpp=11.8.0.86=0
- libnsl=2.0.1=hd590300_0
- libnvjpeg=11.9.0.86=0
- libsqlite=3.44.2=h2797004_0
- libstdcxx-ng=13.2.0=h7e041cc_3
- libuuid=2.38.1=h0b41bf4_0
- libxml2=2.11.6=h232c23b_0
- libzlib=1.2.13=hd590300_5
- lightning=2.1.2=pyhd8ed1ab_0
- lightning-cloud=0.5.39=pyhd8ed1ab_0
- lightning-utilities=0.10.0=pyhd8ed1ab_0
- llvm-openmp=15.0.7=h0cdce71_0
- markdown-it-py=3.0.0=pyhd8ed1ab_0
- markupsafe=2.1.3=py311h459d7ec_1
- mdurl=0.1.0=pyhd8ed1ab_0
- mkl=2022.1.0=h84fe81f_915
- mkl-devel=2022.1.0=ha770c72_916
- mkl-include=2022.1.0=h84fe81f_915
- more-itertools=10.1.0=pyhd8ed1ab_0
- mpc=1.3.1=hfe3b2da_0
- mpfr=4.2.1=h9458935_0
- mpmath=1.3.0=pyhd8ed1ab_0
- msgpack-python=1.0.7=py311h9547e67_0
- ncurses=6.4=h59595ed_2
- networkx=3.2.1=pyhd8ed1ab_0
- numpy=1.26.2=py311h64a7726_0
- openssl=3.2.0=hd590300_1
- ordered-set=4.1.0=pyhd8ed1ab_0
- orjson=3.9.10=py311h34b1e23_0
- packaging=23.2=pyhd8ed1ab_0
- pandas=2.1.3=py311h320fe9a_0
- pastel=0.2.1=pyhd8ed1ab_0
- pcre2=10.42=hcad00b1_0
- pexpect=4.8.0=pyh1a96a4e_2
- pip=23.3.1=pyhd8ed1ab_0
- pkginfo=1.9.6=pyhd8ed1ab_0
- platformdirs=3.11.0=pyhd8ed1ab_0
- poetry=1.7.1=linux_pyha804496_0
- poetry-core=1.8.1=pyhd8ed1ab_0
- poetry-plugin-export=1.6.0=pyhd8ed1ab_0
- psutil=5.9.5=py311h459d7ec_1
- ptyprocess=0.7.0=pyhd3deb0d_0
- pycparser=2.21=pyhd8ed1ab_0
- pydantic=2.1.1=pyhd8ed1ab_0
- pydantic-core=2.4.0=py311h46250e7_0
- pyg=2.4.0=py311_torch_2.1.0_cu118
- pygments=2.17.2=pyhd8ed1ab_0
- pyjwt=2.8.0=pyhd8ed1ab_0
- pylev=1.4.0=pyhd8ed1ab_0
- pyparsing=3.1.1=pyhd8ed1ab_0
- pyproject_hooks=1.0.0=pyhd8ed1ab_0
- pysocks=1.7.1=pyha2e5f31_6
- python=3.11.6=hab00c5b_0_cpython
- python-build=1.0.3=pyhd8ed1ab_0
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python-editor=1.0.4=py_0
- python-fastjsonschema=2.19.0=pyhd8ed1ab_0
- python-installer=0.7.0=pyhd8ed1ab_0
- python-multipart=0.0.6=pyhd8ed1ab_0
- python-tzdata=2023.3=pyhd8ed1ab_0
- python_abi=3.11=4_cp311
- pytorch=2.1.1=py3.11_cuda11.8_cudnn8.7.0_0
- pytorch-cuda=11.8=h7e8668a_5
- pytorch-lightning=2.1.1=pyhd8ed1ab_0
- pytorch-mutex=1.0=cuda
- pytz=2023.3.post1=pyhd8ed1ab_0
- pyyaml=6.0.1=py311h459d7ec_1
- rapidfuzz=3.5.2=py311hb755f60_0
- readchar=4.0.5=pyhd8ed1ab_0
- readline=8.2=h8228510_1
- requests=2.31.0=pyhd8ed1ab_0
- requests-toolbelt=1.0.0=pyhd8ed1ab_0
- rich=13.7.0=pyhd8ed1ab_0
- ruamel.yaml=0.18.5=py311h459d7ec_0
- ruamel.yaml.clib=0.2.7=py311h459d7ec_2
- scikit-learn=1.3.2=py311hc009520_1
- scipy=1.11.4=py311h64a7726_0
- secretstorage=3.3.3=py311h38be061_2
- setuptools=68.2.2=pyhd8ed1ab_0
- shellingham=1.5.4=pyhd8ed1ab_0
- six=1.16.0=pyh6c4a22f_0
- smmap=5.0.0=pyhd8ed1ab_0
- sniffio=1.3.0=pyhd8ed1ab_0
- soupsieve=2.5=pyhd8ed1ab_1
- starlette=0.27.0=pyhd8ed1ab_0
- starsessions=1.3.0=pyhd8ed1ab_0
- sympy=1.12=pypyh9d50eac_103
- tbb=2021.10.0=h00ab1b0_2
- threadpoolctl=3.2.0=pyha21a80b_0
- tk=8.6.13=noxft_h4845f30_101
- tomli=2.0.1=pyhd8ed1ab_0
- tomlkit=0.12.3=pyha770c72_0
- toolz=0.12.0=pyhd8ed1ab_0
- torchmetrics=1.2.1=pyhd8ed1ab_0
- torchtriton=2.1.0=py311
- tqdm=4.66.1=pyhd8ed1ab_0
- traitlets=5.14.0=pyhd8ed1ab_0
- trove-classifiers=2023.11.29=pyhd8ed1ab_0
- types-python-dateutil=2.8.19.14=pyhd8ed1ab_0
- typing-extensions=4.8.0=hd8ed1ab_0
- typing_extensions=4.8.0=pyha770c72_0
- tzdata=2023c=h71feb2d_0
- urllib3=1.26.18=pyhd8ed1ab_0
- uvicorn=0.24.0.post1=py311h38be061_0
- virtualenv=20.25.0=pyhd8ed1ab_0
- wcwidth=0.2.12=pyhd8ed1ab_0
- webencodings=0.5.1=pyhd8ed1ab_2
- websocket-client=1.7.0=pyhd8ed1ab_0
- websockets=12.0=py311h459d7ec_0
- werkzeug=3.0.1=pyhd8ed1ab_0
- wheel=0.42.0=pyhd8ed1ab_0
- xz=5.2.6=h166bdaf_0
- yaml=0.2.5=h7f98852_2
- zipp=3.17.0=pyhd8ed1ab_0
- pip:
- adabelief-pytorch==0.2.1
- aiosignal==1.3.1
- attrs==23.1.0
- cachedmethods==0.1.4
- cgrtools==4.1.35
- custom-inherit==2.4.1
- frozenlist==1.4.0
- future==0.18.3
- jsonschema==4.20.0
- jsonschema-specifications==2023.11.2
- multipledispatch==1.0.0
- pillow==10.1.0
- protobuf==4.25.1
- py-mini-racer==0.6.0
- pypng==0.20220715.0
- ray==2.8.1
- referencing==0.31.1
- reportlab==4.0.7
- rpds-py==0.13.2
- structurefingerprint==2.1
- tabulate==0.9.0
- toyplot==1.0.3
- toytree==2.0.1
prefix: /home/tagir/mambaforge/envs/syntool_env #TODO change