--region MT:1-500

[Pharmacogenetecist]

Is it possible to assess the entire MT region 1 - 16569 ?

I tried it and got an "IndexError: list assignment index out of range"

I believe this is coming from the --normalise command. However, I believe this is required if going onto generating a report.

[drmjc]

Don't specify the - - region

…

On Fri, 7 Oct 2022, 3:53 am Simran Maggo, ***@***.***> wrote: Is it possible to assess the entire MT region 1 - 16569 ? I tried it and got an "IndexError: list assignment index out of range" — Reply to this email directly, view it on GitHub <#19>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAEQQMZXN2JUJV77VS5HVCDWB37ZXANCNFSM6AAAAAAQ62GJIQ> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

[Pharmacogenetecist]

Don't specify the - - region
…

When not specifying a region, I still get the same error with the --normalise.

[Pharmacogenetecist]

Don't specify the - - region
…
On Fri, 7 Oct 2022, 3:53 am Simran Maggo, @.> wrote: Is it possible to assess the entire MT region 1 - 16569 ? I tried it and got an "IndexError: list assignment index out of range" — Reply to this email directly, view it on GitHub <#19>, or unsubscribe https://github.com/notifications/unsubscribe-auth/AAEQQMZXN2JUJV77VS5HVCDWB37ZXANCNFSM6AAAAAAQ62GJIQ . You are receiving this because you are subscribed to this thread.Message ID: @.>

The error seems to come about when using --normalise.
If I do not specify a region + --normalise = error
If I do not specify a region - --normalise = no error.