/
pg-het-ins.json
79 lines (79 loc) · 2.01 KB
/
pg-het-ins.json
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{
"edges": [
{
"from": "source",
"name": "source_ref-chr1:939420-939570",
"to": "ref-chr1:939420-939570"
},
{
"from": "ref-chr1:939420-939570",
"name": "ref-chr1:939420-939570_chr1:939571-939570:CCCTGGAGGACC",
"sequences": [
"ALT"
],
"to": "chr1:939571-939570:CCCTGGAGGACC"
},
{
"from": "ref-chr1:939420-939570",
"name": "ref-chr1:939420-939570_ref-chr1:939571-939720",
"sequences": [
"REF"
],
"to": "ref-chr1:939571-939720"
},
{
"from": "chr1:939571-939570:CCCTGGAGGACC",
"name": "chr1:939571-939570:CCCTGGAGGACC_ref-chr1:939571-939720",
"sequences": [
"ALT"
],
"to": "ref-chr1:939571-939720"
},
{
"from": "ref-chr1:939571-939720",
"name": "ref-chr1:939571-939720_sink",
"to": "sink"
}
],
"model_name": "Graph from pg-het-ins/pg-het-ins.vcf",
"nodes": [
{
"name": "source",
"sequence": "NNNNNNNNNN"
},
{
"name": "ref-chr1:939420-939570",
"reference": "chr1:939420-939570"
},
{
"name": "chr1:939571-939570:CCCTGGAGGACC",
"position": "chr1:939571-939570",
"sequence": "CCCTGGAGGACC"
},
{
"name": "ref-chr1:939571-939720",
"reference": "chr1:939571-939720"
},
{
"name": "sink",
"sequence": "NNNNNNNNNN"
}
],
"paths": [
{
"nodes": [
"ref-chr1:939420-939570",
"ref-chr1:939571-939720"
],
"path_id": "REF|1",
"sequence": "REF"
}
],
"sequencenames": [
"ALT",
"REF"
],
"target_regions": [
"chr1:939420-939720"
]
}