{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":352969947,"defaultBranch":"main","name":"Clair3","ownerLogin":"HKU-BAL","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2021-03-30T11:02:58.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/13270645?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1714451462.0","currentOid":""},"activityList":{"items":[{"before":"9ba40d854761f3089938cd4535982d289c37af04","after":"750f5335a68813d9c2f2c82d026754ce5bb04734","ref":"refs/heads/main","pushedAt":"2024-04-30T04:12:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aquaskyline","name":"Ruibang Luo","path":"/aquaskyline","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/895289?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"029e750c34a0bfd10a9b705905c9fd6ec5d3574e","after":"9ba40d854761f3089938cd4535982d289c37af04","ref":"refs/heads/main","pushedAt":"2024-04-29T11:07:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"9c50d510128875f2ef09b93732f2c8667eb7fc7d","after":"029e750c34a0bfd10a9b705905c9fd6ec5d3574e","ref":"refs/heads/main","pushedAt":"2024-04-25T07:21:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Update LongPhase to v1.7","shortMessageHtmlLink":"Update LongPhase to v1.7"}},{"before":"6e3f1a7dfab7241b59d96d57e3f2cd936bf8c1b3","after":"9c50d510128875f2ef09b93732f2c8667eb7fc7d","ref":"refs/heads/main","pushedAt":"2024-04-19T04:30:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"remove PL field in intermediate phasing","shortMessageHtmlLink":"remove PL field in intermediate phasing"}},{"before":"c4c72f903158edba2e2acce6a3b1e8d73cd201dd","after":"6e3f1a7dfab7241b59d96d57e3f2cd936bf8c1b3","ref":"refs/heads/main","pushedAt":"2024-04-07T10:22:44.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Merge remote-tracking branch 'origin/main' into main","shortMessageHtmlLink":"Merge remote-tracking branch 'origin/main' into main"}},{"before":"4b5cfb000a2cdabbb32683063ec75cfe27457a22","after":"c4c72f903158edba2e2acce6a3b1e8d73cd201dd","ref":"refs/heads/main","pushedAt":"2024-04-06T12:15:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Update Makefile","shortMessageHtmlLink":"Update Makefile"}},{"before":"328532b6fec137a7e1e99c08e70a30ac229d3985","after":"4b5cfb000a2cdabbb32683063ec75cfe27457a22","ref":"refs/heads/main","pushedAt":"2024-04-06T10:44:22.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"update longphase to 1.6 using binary file","shortMessageHtmlLink":"update longphase to 1.6 using binary file"}},{"before":"3afa8d0f9f8bcc3ca02ebd90bd1db4b4f4fd471e","after":"328532b6fec137a7e1e99c08e70a30ac229d3985","ref":"refs/heads/main","pushedAt":"2024-04-06T06:32:24.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Merge pull request #292 from dpryan79/infinite_maxcnt\n\nTry to remove the default depth filter in the pileup. Also fix the version","shortMessageHtmlLink":"Merge pull request #292 from dpryan79/infinite_maxcnt"}},{"before":"f08f0c7d49ca15243de09608243ecfda9ce6ea64","after":"3afa8d0f9f8bcc3ca02ebd90bd1db4b4f4fd471e","ref":"refs/heads/main","pushedAt":"2024-04-06T06:31:24.000Z","pushType":"pr_merge","commitsCount":5,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Merge pull request #286 from nanoporetech/fa_test\n\ntested and merged","shortMessageHtmlLink":"Merge pull request #286 from nanoporetech/fa_test"}},{"before":"d271a47ef8d372010364ebc9eadf2ca88d72d897","after":"f08f0c7d49ca15243de09608243ecfda9ce6ea64","ref":"refs/heads/main","pushedAt":"2024-03-16T06:06:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"41d3dfc1e6befe1d8f5c8e8e3250e9f6bf971803","after":"d271a47ef8d372010364ebc9eadf2ca88d72d897","ref":"refs/heads/main","pushedAt":"2024-03-16T04:45:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"set min_snp_af and min_indel_af to 0.0 when vcf_fn is provided","shortMessageHtmlLink":"set min_snp_af and min_indel_af to 0.0 when vcf_fn is provided"}},{"before":"9739f081a0b4029fd0ca6b5fe5c526d9905f7945","after":"41d3dfc1e6befe1d8f5c8e8e3250e9f6bf971803","ref":"refs/heads/main","pushedAt":"2024-03-16T01:55:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aquaskyline","name":"Ruibang Luo","path":"/aquaskyline","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/895289?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"fa0c7e8afc3b12d82261684c54b9fe92daa7d88c","after":"9739f081a0b4029fd0ca6b5fe5c526d9905f7945","ref":"refs/heads/main","pushedAt":"2024-03-16T01:54:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aquaskyline","name":"Ruibang Luo","path":"/aquaskyline","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/895289?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"e70c228d1419c57118a7fc0f4bb1fdb8107a5e38","after":"fa0c7e8afc3b12d82261684c54b9fe92daa7d88c","ref":"refs/heads/main","pushedAt":"2024-03-15T13:49:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"updated readme","shortMessageHtmlLink":"updated readme"}},{"before":"c83a483ecd1d1fd92275a041017400e73d05d436","after":"e70c228d1419c57118a7fc0f4bb1fdb8107a5e38","ref":"refs/heads/main","pushedAt":"2024-03-15T08:14:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Update version","shortMessageHtmlLink":"Update version"}},{"before":"9c078481263f1bd9d4f857214e9c6c5c277e2c5d","after":"c83a483ecd1d1fd92275a041017400e73d05d436","ref":"refs/heads/main","pushedAt":"2024-03-15T08:10:56.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"add pileup params","shortMessageHtmlLink":"add pileup params"}},{"before":null,"after":"8f569c21fc964e642348c9ab0d9961b6c0d49a66","ref":"refs/heads/detached","pushedAt":"2024-03-15T08:07:40.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"751307fd5df4e3912b98a24ff1909363f6f90ae6","after":"9c078481263f1bd9d4f857214e9c6c5c277e2c5d","ref":"refs/heads/main","pushedAt":"2024-03-15T07:37:43.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Merge pull request #278 from ASLeonard/main\n\npass reference to htsfile for better cram support","shortMessageHtmlLink":"Merge pull request #278 from ASLeonard/main"}},{"before":"366bee5046c57f50c154c716a8dc9c04bafbc369","after":"751307fd5df4e3912b98a24ff1909363f6f90ae6","ref":"refs/heads/main","pushedAt":"2024-03-15T07:37:01.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Merge pull request #282 from nanoporetech/stack-allocs\n\nAvoid potentially large stack allocation, clean up int usage","shortMessageHtmlLink":"Merge pull request #282 from nanoporetech/stack-allocs"}},{"before":"8f569c21fc964e642348c9ab0d9961b6c0d49a66","after":"366bee5046c57f50c154c716a8dc9c04bafbc369","ref":"refs/heads/main","pushedAt":"2024-01-24T03:52:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aquaskyline","name":"Ruibang Luo","path":"/aquaskyline","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/895289?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"810811ea7523c567bf0239d7548ce595ee294baf","after":"8f569c21fc964e642348c9ab0d9961b6c0d49a66","ref":"refs/heads/main","pushedAt":"2023-12-20T09:02:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"bcffcb07f7eb774c57339df0a6b87fe889cd95ee","after":"810811ea7523c567bf0239d7548ce595ee294baf","ref":"refs/heads/main","pushedAt":"2023-12-19T14:11:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"updated version","shortMessageHtmlLink":"updated version"}},{"before":"52167e45ad0c97380cfc59edfb58e7a19b0b74c2","after":"bcffcb07f7eb774c57339df0a6b87fe889cd95ee","ref":"refs/heads/main","pushedAt":"2023-12-19T14:10:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"updated version","shortMessageHtmlLink":"updated version"}},{"before":"e571c7ca3d25a34f08f111c25c7be4da396dfb28","after":"52167e45ad0c97380cfc59edfb58e7a19b0b74c2","ref":"refs/heads/main","pushedAt":"2023-12-19T13:59:21.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Merge remote-tracking branch 'origin/main' into main","shortMessageHtmlLink":"Merge remote-tracking branch 'origin/main' into main"}},{"before":"bac4ab368a2030d9ff197fda19efa25904f04ba6","after":"e571c7ca3d25a34f08f111c25c7be4da396dfb28","ref":"refs/heads/main","pushedAt":"2023-11-21T03:28:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aquaskyline","name":"Ruibang Luo","path":"/aquaskyline","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/895289?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"0a35540c4403e66403310e0be082172e564ae02a","after":"bac4ab368a2030d9ff197fda19efa25904f04ba6","ref":"refs/heads/main","pushedAt":"2023-11-21T02:20:37.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Merge remote-tracking branch 'origin/main' into main","shortMessageHtmlLink":"Merge remote-tracking branch 'origin/main' into main"}},{"before":"3e24d466cf905b862142bb0431141266f132a450","after":"0a35540c4403e66403310e0be082172e564ae02a","ref":"refs/heads/main","pushedAt":"2023-11-15T08:57:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aquaskyline","name":"Ruibang Luo","path":"/aquaskyline","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/895289?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"5708e725c31c208c97c00f8803654381aec1bf7e","after":"3e24d466cf905b862142bb0431141266f132a450","ref":"refs/heads/main","pushedAt":"2023-11-14T10:41:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"aquaskyline","name":"Ruibang Luo","path":"/aquaskyline","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/895289?s=80&v=4"},"commit":{"message":"Add 'Dealing with amplicon data' to README.md","shortMessageHtmlLink":"Add 'Dealing with amplicon data' to README.md"}},{"before":"181f55d7a741855597d083baffc4551949d2837e","after":"5708e725c31c208c97c00f8803654381aec1bf7e","ref":"refs/heads/main","pushedAt":"2023-08-21T08:08:36.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"updated reference coverage calculation","shortMessageHtmlLink":"updated reference coverage calculation"}},{"before":"bfa87b5b3a965cef7e485cc97cc5ca6db93f6a0e","after":"181f55d7a741855597d083baffc4551949d2837e","ref":"refs/heads/main","pushedAt":"2023-07-20T02:58:21.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"zhengzhenxian","name":"zhenxian","path":"/zhengzhenxian","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/31127584?s=80&v=4"},"commit":{"message":"Merge remote-tracking branch 'origin/main' into main","shortMessageHtmlLink":"Merge remote-tracking branch 'origin/main' into main"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEPZlnbgA","startCursor":null,"endCursor":null}},"title":"Activity ยท HKU-BAL/Clair3"}