requirements-dev.txt

#
# This file is autogenerated by pip-compile with Python 3.10
# by the following command:
#
#    pip-compile requirements-dev.in
#
aiohttp==3.8.5
    # via
    #   -c requirements.txt
    #   tuspy
aiosignal==1.3.1
    # via
    #   -c requirements.txt
    #   aiohttp
anyio==3.7.1
    # via
    #   -c requirements.txt
    #   jupyter-server
arcp==0.2.1
    # via
    #   -c requirements.txt
    #   rocrate
argon2-cffi==23.1.0
    # via
    #   -c requirements.txt
    #   jupyter-server
argon2-cffi-bindings==21.2.0
    # via
    #   -c requirements.txt
    #   argon2-cffi
arrow==1.2.3
    # via
    #   -c requirements.txt
    #   isoduration
asttokens==2.2.1
    # via
    #   -c requirements.txt
    #   stack-data
async-timeout==4.0.3
    # via
    #   -c requirements.txt
    #   aiohttp
attrs==23.1.0
    # via
    #   -c requirements.txt
    #   aiohttp
    #   jsonschema
    #   referencing
autopep8==2.0.4
    # via nbqa
backcall==0.2.0
    # via
    #   -c requirements.txt
    #   ipython
beautifulsoup4==4.12.2
    # via
    #   -c requirements.txt
    #   nbconvert
bioblend==1.2.0
    # via
    #   -c requirements.txt
    #   gxformat2
black[jupyter]==23.10.0
    # via -r requirements-dev.in
bleach==6.0.0
    # via
    #   -c requirements.txt
    #   nbconvert
cachecontrol[filecache]==0.13.1
    # via
    #   -c requirements.txt
    #   schema-salad
certifi==2023.7.22
    # via
    #   -c requirements.txt
    #   requests
cffi==1.15.1
    # via
    #   -c requirements.txt
    #   argon2-cffi-bindings
cfgv==3.4.0
    # via pre-commit
charset-normalizer==3.2.0
    # via
    #   -c requirements.txt
    #   aiohttp
    #   requests
click==8.1.7
    # via
    #   -c requirements.txt
    #   black
    #   rocrate
comm==0.1.4
    # via
    #   -c requirements.txt
    #   ipykernel
coverage==7.3.2
    # via nbval
debugpy==1.6.7.post1
    # via
    #   -c requirements.txt
    #   ipykernel
decorator==5.1.1
    # via
    #   -c requirements.txt
    #   ipython
defusedxml==0.7.1
    # via
    #   -c requirements.txt
    #   nbconvert
distlib==0.3.7
    # via virtualenv
exceptiongroup==1.1.3
    # via
    #   -c requirements.txt
    #   anyio
    #   pytest
executing==1.2.0
    # via
    #   -c requirements.txt
    #   stack-data
fastjsonschema==2.18.0
    # via
    #   -c requirements.txt
    #   nbformat
filelock==3.12.3
    # via
    #   -c requirements.txt
    #   cachecontrol
    #   virtualenv
flake8==6.1.0
    # via -r requirements-dev.in
fqdn==1.5.1
    # via
    #   -c requirements.txt
    #   jsonschema
frozenlist==1.4.0
    # via
    #   -c requirements.txt
    #   aiohttp
    #   aiosignal
future==0.18.3
    # via
    #   -c requirements.txt
    #   tuspy
galaxy2cwl==0.1.4
    # via
    #   -c requirements.txt
    #   rocrate
gitdb==4.0.11
    # via gitpython
gitpython==3.1.40
    # via -r requirements-dev.in
giturlparse==0.12.0
    # via -r requirements-dev.in
gxformat2==0.18.0
    # via
    #   -c requirements.txt
    #   galaxy2cwl
identify==2.5.30
    # via pre-commit
idna==3.4
    # via
    #   -c requirements.txt
    #   anyio
    #   jsonschema
    #   requests
    #   yarl
importlib-resources==6.0.1
    # via
    #   -c requirements.txt
    #   schema-salad
iniconfig==2.0.0
    # via pytest
ipykernel==6.25.1
    # via
    #   -c requirements.txt
    #   nbval
ipython==8.14.0
    # via
    #   -c requirements.txt
    #   black
    #   ipykernel
    #   nbqa
isodate==0.6.1
    # via
    #   -c requirements.txt
    #   rdflib
isoduration==20.11.0
    # via
    #   -c requirements.txt
    #   jsonschema
isort==5.12.0
    # via -r requirements-dev.in
jedi==0.19.0
    # via
    #   -c requirements.txt
    #   ipython
jinja2==3.1.2
    # via
    #   -c requirements.txt
    #   jupyter-server
    #   nbconvert
    #   rocrate
jsonpointer==2.4
    # via
    #   -c requirements.txt
    #   jsonschema
jsonschema[format-nongpl]==4.19.0
    # via
    #   -c requirements.txt
    #   jupyter-events
    #   nbformat
jsonschema-specifications==2023.7.1
    # via
    #   -c requirements.txt
    #   jsonschema
jupyter-client==8.3.1
    # via
    #   -c requirements.txt
    #   ipykernel
    #   jupyter-server
    #   nbclient
    #   nbval
jupyter-core==5.3.1
    # via
    #   -c requirements.txt
    #   ipykernel
    #   jupyter-client
    #   jupyter-server
    #   nbclient
    #   nbconvert
    #   nbformat
jupyter-events==0.7.0
    # via
    #   -c requirements.txt
    #   jupyter-server
jupyter-server==2.7.2
    # via
    #   -c requirements.txt
    #   jupyterlab-code-formatter
jupyter-server-terminals==0.4.4
    # via
    #   -c requirements.txt
    #   jupyter-server
jupyterlab-code-formatter==2.2.1
    # via -r requirements-dev.in
jupyterlab-pygments==0.2.2
    # via
    #   -c requirements.txt
    #   nbconvert
markupsafe==2.1.3
    # via
    #   -c requirements.txt
    #   jinja2
    #   nbconvert
matplotlib-inline==0.1.6
    # via
    #   -c requirements.txt
    #   ipykernel
    #   ipython
mccabe==0.7.0
    # via flake8
mistune==2.0.5
    # via
    #   -c requirements.txt
    #   nbconvert
    #   schema-salad
msgpack==1.0.5
    # via
    #   -c requirements.txt
    #   cachecontrol
multidict==6.0.4
    # via
    #   -c requirements.txt
    #   aiohttp
    #   yarl
mypy-extensions==1.0.0
    # via
    #   -c requirements.txt
    #   black
    #   schema-salad
nbclient==0.7.4
    # via
    #   -c requirements.txt
    #   nbconvert
nbconvert==7.7.4
    # via
    #   -c requirements.txt
    #   jupyter-server
nbformat==5.9.2
    # via
    #   -c requirements.txt
    #   jupyter-server
    #   nbclient
    #   nbconvert
    #   nbval
nbqa==1.7.0
    # via -r requirements-dev.in
nbval==0.10.0
    # via -r requirements-dev.in
nest-asyncio==1.5.7
    # via
    #   -c requirements.txt
    #   ipykernel
nodeenv==1.8.0
    # via pre-commit
overrides==7.4.0
    # via
    #   -c requirements.txt
    #   jupyter-server
packaging==23.1
    # via
    #   -c requirements.txt
    #   black
    #   ipykernel
    #   jupyter-server
    #   jupyterlab-code-formatter
    #   nbconvert
    #   pytest
pandocfilters==1.5.0
    # via
    #   -c requirements.txt
    #   nbconvert
parso==0.8.3
    # via
    #   -c requirements.txt
    #   jedi
pathspec==0.11.2
    # via black
pexpect==4.8.0
    # via
    #   -c requirements.txt
    #   ipython
pickleshare==0.7.5
    # via
    #   -c requirements.txt
    #   ipython
platformdirs==3.10.0
    # via
    #   -c requirements.txt
    #   black
    #   jupyter-core
    #   virtualenv
pluggy==1.3.0
    # via
    #   -c requirements.txt
    #   pytest
pre-commit==3.5.0
    # via -r requirements-dev.in
prometheus-client==0.17.1
    # via
    #   -c requirements.txt
    #   jupyter-server
prompt-toolkit==3.0.39
    # via
    #   -c requirements.txt
    #   ipython
psutil==5.9.5
    # via
    #   -c requirements.txt
    #   ipykernel
ptyprocess==0.7.0
    # via
    #   -c requirements.txt
    #   pexpect
    #   terminado
pure-eval==0.2.2
    # via
    #   -c requirements.txt
    #   stack-data
pycodestyle==2.11.1
    # via
    #   autopep8
    #   flake8
pycparser==2.21
    # via
    #   -c requirements.txt
    #   cffi
pyflakes==3.1.0
    # via flake8
pygments==2.16.1
    # via
    #   -c requirements.txt
    #   ipython
    #   nbconvert
pyparsing==3.0.9
    # via
    #   -c requirements.txt
    #   rdflib
pytest==7.4.2
    # via
    #   -r requirements-dev.in
    #   nbval
python-dateutil==2.8.2
    # via
    #   -c requirements.txt
    #   arrow
    #   jupyter-client
    #   rocrate
python-json-logger==2.0.7
    # via
    #   -c requirements.txt
    #   jupyter-events
pyyaml==6.0.1
    # via
    #   -c requirements.txt
    #   galaxy2cwl
    #   gxformat2
    #   jupyter-events
    #   pre-commit
pyzmq==25.1.1
    # via
    #   -c requirements.txt
    #   ipykernel
    #   jupyter-client
    #   jupyter-server
rdflib==6.3.2
    # via
    #   -c requirements.txt
    #   schema-salad
referencing==0.30.2
    # via
    #   -c requirements.txt
    #   jsonschema
    #   jsonschema-specifications
    #   jupyter-events
requests==2.31.0
    # via
    #   -c requirements.txt
    #   bioblend
    #   cachecontrol
    #   requests-toolbelt
    #   rocrate
    #   schema-salad
    #   tuspy
requests-toolbelt==1.0.0
    # via
    #   -c requirements.txt
    #   bioblend
rfc3339-validator==0.1.4
    # via
    #   -c requirements.txt
    #   jsonschema
    #   jupyter-events
rfc3986-validator==0.1.1
    # via
    #   -c requirements.txt
    #   jsonschema
    #   jupyter-events
rocrate==0.9.0
    # via
    #   -c requirements.txt
    #   -r requirements-dev.in
rpds-py==0.10.0
    # via
    #   -c requirements.txt
    #   jsonschema
    #   referencing
ruamel-yaml==0.17.32
    # via
    #   -c requirements.txt
    #   schema-salad
ruamel-yaml-clib==0.2.7
    # via
    #   -c requirements.txt
    #   ruamel-yaml
schema-salad==8.4.20230808163024
    # via
    #   -c requirements.txt
    #   gxformat2
send2trash==1.8.2
    # via
    #   -c requirements.txt
    #   jupyter-server
six==1.16.0
    # via
    #   -c requirements.txt
    #   asttokens
    #   bleach
    #   isodate
    #   python-dateutil
    #   rfc3339-validator
    #   tuspy
smmap==5.0.1
    # via gitdb
sniffio==1.3.0
    # via
    #   -c requirements.txt
    #   anyio
soupsieve==2.4.1
    # via
    #   -c requirements.txt
    #   beautifulsoup4
stack-data==0.6.2
    # via
    #   -c requirements.txt
    #   ipython
terminado==0.17.1
    # via
    #   -c requirements.txt
    #   jupyter-server
    #   jupyter-server-terminals
tinycss2==1.2.1
    # via
    #   -c requirements.txt
    #   nbconvert
tinydb==4.8.0
    # via
    #   -c requirements.txt
    #   tuspy
tokenize-rt==5.2.0
    # via
    #   black
    #   nbqa
tomli==2.0.1
    # via
    #   -c requirements.txt
    #   autopep8
    #   black
    #   nbqa
    #   pytest
tornado==6.3.3
    # via
    #   -c requirements.txt
    #   ipykernel
    #   jupyter-client
    #   jupyter-server
    #   terminado
traitlets==5.9.0
    # via
    #   -c requirements.txt
    #   comm
    #   ipykernel
    #   ipython
    #   jupyter-client
    #   jupyter-core
    #   jupyter-events
    #   jupyter-server
    #   matplotlib-inline
    #   nbclient
    #   nbconvert
    #   nbformat
tuspy==1.0.1
    # via
    #   -c requirements.txt
    #   bioblend
typing-extensions==4.7.1
    # via
    #   -c requirements.txt
    #   bioblend
    #   black
    #   filelock
uri-template==1.3.0
    # via
    #   -c requirements.txt
    #   jsonschema
urllib3==2.0.4
    # via
    #   -c requirements.txt
    #   requests
virtualenv==20.24.5
    # via pre-commit
wcwidth==0.2.6
    # via
    #   -c requirements.txt
    #   prompt-toolkit
webcolors==1.13
    # via
    #   -c requirements.txt
    #   jsonschema
webencodings==0.5.1
    # via
    #   -c requirements.txt
    #   bleach
    #   tinycss2
websocket-client==1.6.2
    # via
    #   -c requirements.txt
    #   jupyter-server
yarl==1.9.2
    # via
    #   -c requirements.txt
    #   aiohttp

# The following packages are considered to be unsafe in a requirements file:
# setuptools