SlicerNotebooks

Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python

Running on Binder

All the notebooks can be run interactively in the web browser via Binder by clicking "Launch binder".

##

Download or clone this repository to your local computer.

Run the docker image as described here.

Download or clone this repository to your local computer.

Follow setup instructions here.

Name		Name	Last commit message	Last commit date
Latest commit History 130 Commits
data		data
etc/dpkg/dpkg.cfg.d		etc/dpkg/dpkg.cfg.d
outputs		outputs
voila		voila
.gitignore		.gitignore
01_Data_loading_and_display.ipynb		01_Data_loading_and_display.ipynb
02_Data_processing.ipynb		02_Data_processing.ipynb
03_Image_Processing_using_SimpleITK.ipynb		03_Image_Processing_using_SimpleITK.ipynb
04_Segmentation.ipynb		04_Segmentation.ipynb
Dockerfile		Dockerfile
LICENSE		LICENSE
README.md		README.md
Test_notebook_m.ipynb		Test_notebook_m.ipynb
UncertainViz.ipynb		UncertainViz.ipynb
app.yml		app.yml
install.sh		install.sh
requirements.txt		requirements.txt
run.sh		run.sh
setup.py		setup.py
slicer_nb_TEST.ipynb		slicer_nb_TEST.ipynb
slicer_nb_with_data.ipynb		slicer_nb_with_data.ipynb
start		start
start-xorg.sh		start-xorg.sh
test_wo_slicer.ipynb		test_wo_slicer.ipynb
websockify		websockify
xorg.conf		xorg.conf