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The question about function relaxModelWithDGoSlacks #4

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pwzation opened this issue Mar 18, 2024 · 0 comments
Open

The question about function relaxModelWithDGoSlacks #4

pwzation opened this issue Mar 18, 2024 · 0 comments

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@pwzation
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Hello!
I'm now trying the matTFA on matlab. When I running the code: [GFModelMaster, conflict] = PrepareForGapFilling(sourceModel,{modelDB},'',0,flagTFA,{},[],thermoData); it gives me this error:
It is possible to obtain TFA-feasible solutions with the original DGo values calculated by GCM!
Wrong use of relaxModelWithDGoSlacks
retry

Error in convToTFA (line 646)
[model, relaxedDGoVarsValues, modelwDGoSlackVars] = relaxModelWithDGoSlacks(model, minObjSolVal, []);

Error in convToTFAStru4gf (line 29)
model = convToTFA(model, DBThermo, rxnsNoThermo,'DGo',[], 0.95*sol.f, [], [], 0);

Error PrepareForGapFilling (line 94)
model4 = convToTFAStru4gf(model3,DBThermo,flagTFA,rxnsNoThermo,metabData);

To be honest, I'm fresh on this function. So how can I check and maintain my DGo value?

Best,
Peng

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