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create a log file #26

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Swarchal opened this issue Feb 12, 2018 · 0 comments
Open

create a log file #26

Swarchal opened this issue Feb 12, 2018 · 0 comments
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enhancement

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@Swarchal
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Inspired by this, it would be nice to create a log of successfully finished jobs. Useful for those jobs that time-out without returning an error.

Can also check the length of the log file after each cellprofiler run, and if this matches the number of tasks then the array-job has successfully finished and can trigger a script that pulls all the csv files into a database.
Swarchal pushed a commit that referenced this issue Feb 13, 2018
print status of finished jobs to a log-file (towards #26)
d4dfe26
Swarchal pushed a commit that referenced this issue Feb 13, 2018
add missing " (towards #26)
836289d
Swarchal pushed a commit that referenced this issue Feb 13, 2018
fix spacing (towards #26)
369d779
Swarchal pushed a commit that referenced this issue Feb 13, 2018
send email if job ran successfully (towards #26)
7a6f8ff
Swarchal pushed a commit that referenced this issue Feb 13, 2018
quote variables (towards #26)
110be16 
stop any weird errors occuring if the log location contains spaces
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@Swarchal