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Yes we would very much like to see this implemented. I have done a rudimentary version using the same search string you guys used slightly modified:
biomol_genomic[PROP] AND plasmid[filter] NOT complete cds[Title] NOT gene[Title] NOT genes[Title] NOT contig[Title] NOT scaffold[Title] NOT whole genome map[Title] NOT partial sequence[Title] NOT partial plasmid[Title] NOT locus[Title] NOT region[Title] NOT fragment[Title] NOT integron[Title] NOT transposon[Title] NOT insertion sequence[Title] NOT insertion element[Title] NOT phage[Title] NOT operon[Title] AND archaea[filter]
Made non-redundant by mash clustering with dist = 0
Seems like this would be an excellent addition to the next update!
PLSDB currently hosts only bacterial plasmids. WOuld it be within the project's scope to also add plasmids of Archaea?
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