8547 segmentation fault

[haduong136]

Hi,

I tried to run the LDBlockShow but it ran into the "8547 segmentation fault" and I'm not sure how to fix it, could you please check? Thanks!

➜ Ara_test git:(main) ✗ ../../bin/LDBlockShow -InVCF Ara_Ch4.vcf -OutPut out -Region chr4:920000:9240000 -OutPng
[1] 8547 segmentation fault ../../bin/LDBlockShow -InVCF Ara_Ch4.vcf -OutPut out -Region -OutPng

I attached here the head 50 of my vcf
50_Ara_Chr4.txt

[hewm2008]

I have never encountered this error. I feel that there may be a problem with the SNP site format in your region. You can extract the SNP in this region and send it to me, and I will help you take a look.