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Lesson 4 -- RNA assembly with Trinity

Initially forked from here. Thank you to the awesome binder team!

Binder

Part of the Bioinformatics Virtual Coordination Network :)

This tutorial is a step-by-step guide on how to de novo assemble pared-end RNA reads.

Recommended knowledge base and/or pre-reading

Quality Control using FastQC and MultiQC

rRNA depletion

This tutorial will take you through the general advice provided on the Best practices for de novo transcriptome assembly with Trinity

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Tutorial on transcriptome assembly using Trinity

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