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apollo_types_3.1.0.xsd
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apollo_types_3.1.0.xsd
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<?xml version="1.0" encoding="UTF-8"?>
<schema xmlns:tns="http://types.apollo.pitt.edu/v3_1_0/" xmlns="http://www.w3.org/2001/XMLSchema" targetNamespace="http://types.apollo.pitt.edu/v3_1_0/" elementFormDefault="qualified">
<simpleType name="Probability">
<restriction base="double">
<minInclusive value="0"/>
<maxInclusive value="1"/>
</restriction>
</simpleType>
<simpleType name="ApolloSoftwareTypeEnum">
<restriction base="string">
<enumeration value="simulator"/>
<enumeration value="batchSimulator"/>
<enumeration value="visualizer"/>
<enumeration value="syntheticPopulationGenerator"/>
<enumeration value="translator"/>
<enumeration value="data"/>
<enumeration value="broker"/>
<enumeration value="endUserApplication"/>
<enumeration value="runManager"/>
</restriction>
</simpleType>
<complexType name="SoftwareIdentification">
<sequence>
<element name="softwareDeveloper" type="token" maxOccurs="1" minOccurs="1"/>
<element name="softwareName" type="token" maxOccurs="1" minOccurs="1"/>
<element name="softwareVersion" type="token" maxOccurs="1" minOccurs="1"/>
<element name="softwareType" type="tns:ApolloSoftwareTypeEnum" maxOccurs="1" minOccurs="1"/>
<element name="softwareLicenseIdentification" type="tns:SoftwareLicenseIdentification" minOccurs="0"/>
<element name="customIdentifier" type="token" minOccurs="0"/>
</sequence>
</complexType>
<complexType name="SoftwareLicenseIdentification">
<sequence>
<element name="licenseLocation" type="anyURI"/>
<element name="licenseVersion" type="token"/>
<element name="licenseName" type="token"/>
<element name="attributionNotice" type="string"/>
</sequence>
</complexType>
<simpleType name="Fraction">
<restriction base="double">
<minInclusive value="0"/>
<maxInclusive value="1"/>
</restriction>
</simpleType>
<simpleType name="PositiveDouble">
<restriction base="double">
<minExclusive value="0"/>
</restriction>
</simpleType>
<simpleType name="NonNegativeDouble">
<restriction base="double">
<minInclusive value="0"/>
</restriction>
</simpleType>
<simpleType name="SimulatorTypeEnum">
<restriction base="string">
<enumeration value="agent-based"/>
<enumeration value="compartmental"/>
</restriction>
</simpleType>
<simpleType name="UnitOfTimeEnum">
<restriction base="string">
<enumeration value="year"/>
<enumeration value="month"/>
<enumeration value="day"/>
<enumeration value="hour"/>
<enumeration value="minute"/>
<enumeration value="second"/>
<enumeration value="millisecond"/>
</restriction>
</simpleType>
<simpleType name="GenderEnum">
<restriction base="string">
<enumeration value="M"/>
<enumeration value="F"/>
<enumeration value="U"/>
</restriction>
</simpleType>
<simpleType name="SourceOfInfectionEnum">
<restriction base="string">
<enumeration value="syringe"/>
<enumeration value="infectiousHost"/>
<enumeration value="eitherSyringeOrInfectiousHost"/>
</restriction>
</simpleType>
<complexType name="SimulatorTimeSpecification">
<sequence>
<element name="unitOfTimeForSimulatorTimeStep" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1"/>
<element name="numberOfUnitsOfTimeInOneSimulatorTimeStep" maxOccurs="1" minOccurs="1" type="tns:PositiveDouble"/>
<element name="runLength" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="IndividualTreatmentControlMeasure">
<complexContent>
<extension base="tns:InfectiousDiseaseControlMeasure">
<sequence>
<element name="pathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
<element name="taxonOfTreatedIndividual" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
<element name="individualTreatment" type="tns:Treatment" maxOccurs="1" minOccurs="1"/>
<element name="populationTreatmentCensus" type="tns:PopulationTreatmentCensus" maxOccurs="1" minOccurs="0"/>
<element name="compliance" type="tns:ProbabilisticParameter" maxOccurs="1" minOccurs="1"/>
<element name="delayFromSymptomsToTreatment" type="tns:Duration" maxOccurs="1" minOccurs="0"/>
<element name="targetPopulationsAndPrioritizations" type="tns:ControlMeasureTargetPopulationsAndPrioritization" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="Vaccination">
<complexContent>
<extension base="tns:Treatment">
<sequence>
<element name="vaccineId" type="tns:vaccineOntologyId" maxOccurs="1" minOccurs="1"/>
<element name="vaccinationEfficacies" type="tns:VaccinationEfficacyForSimulatorConfiguration" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="IndividualDecolonization">
<complexContent>
<extension base="tns:Treatment">
<sequence>
<element name="name" type="tns:IndividualDecolonizationEnum" maxOccurs="1" minOccurs="1"/>
<element name="efficacies" type="string" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="RingIndividualTreatmentControlMeasure">
<complexContent>
<extension base="tns:IndividualTreatmentControlMeasure">
<sequence>
<element name="ringDiameterInMeters" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="Infection">
<complexContent>
<extension base="tns:ApolloIndexableItem">
<sequence>
<element name="pathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
<element name="host" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
<element name="infectiousDiseases" type="tns:InfectiousDisease" maxOccurs="unbounded" minOccurs="0"/>
<element name="infectionAcquisitionsFromInfectedHosts" type="tns:InfectionAcquisitionFromInfectedHost" maxOccurs="unbounded" minOccurs="0"/>
<element name="infectionAcquisitionsFromContaminatedThings" type="tns:InfectionAcquisitionFromContaminatedAbioticThing" maxOccurs="unbounded" minOccurs="0"/>
<element name="infectionAcquisitionsFromColonizedHosts" type="tns:InfectionAcquisitionFromColonizedHost" maxOccurs="unbounded" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="Contamination">
<complexContent>
<extension base="tns:ApolloIndexableItem">
<sequence>
<element name="pathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
<element name="abioticThing" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1"/>
<element name="contaminationDuration" type="tns:Duration" maxOccurs="1" minOccurs="1"/>
<element name="contaminationAcquisition" type="tns:ContaminationAcquisition" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="Colonization">
<complexContent>
<extension base="tns:ApolloIndexableItem">
<sequence>
<element name="pathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
<element name="host" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
<element name="colonizationDuration" type="tns:Duration" maxOccurs="1" minOccurs="0"/>
<element name="probabilityOfInfectionOverTime" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="0"/>
<element name="colonizationAcquisition" type="tns:ColonizationAcquisition" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="ColonizationAcquisition">
<sequence>
<choice>
<element name="infectiousHostSource" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
<element name="contaminatedSource" type="tns:AbioticThingEnum" maxOccurs="1" minOccurs="1"/>
<element name="colonizedHost" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
</choice>
<choice>
<element name="transmissionProbability" type="tns:TransmissionProbability" maxOccurs="1" minOccurs="1"/>
<element name="beta" type="tns:Rate" maxOccurs="unbounded" minOccurs="1"/>
</choice>
</sequence>
</complexType>
<complexType name="PopulationInfectionAndImmunityCensus">
<complexContent>
<extension base="tns:Census">
<sequence>
<element name="pathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
<element name="censusData" type="tns:PopulationInfectionAndImmunityCensusData" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="PopulationInfectionAndImmunityCensusData">
<complexContent>
<extension base="tns:CensusData">
<sequence>
<element name="censusDataCells" type="tns:PopulationInfectionAndImmunityCensusDataCell" maxOccurs="unbounded" minOccurs="1"/>
<element name="exceptionSubpopulations" type="tns:PopulationInfectionAndImmunityCensusData" maxOccurs="unbounded" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="PopulationTreatmentCensusData">
<complexContent>
<extension base="tns:CensusData">
<sequence>
<element name="treatmentCensusDataCells" type="tns:PopulationTreatmentCensusDataCell" maxOccurs="unbounded" minOccurs="1"/>
<element name="exceptionSubpopulations" type="tns:PopulationTreatmentCensusData" maxOccurs="unbounded" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<simpleType name="ApolloLocationCode">
<restriction base="token">
<pattern value="[A-Z0-9]{2,17}"/>
</restriction>
</simpleType>
<complexType name="RequesterIdentification">
<sequence>
<element name="requesterName" type="token"/>
<element name="requesterCompany" type="token"/>
<element name="requesterEmail" type="token"/>
</sequence>
</complexType>
<complexType name="Vaccine">
<sequence>
<element name="description" type="string" maxOccurs="1" minOccurs="1"/>
<element name="vaccineIdentifier" type="token" maxOccurs="1" minOccurs="1"/>
<element name="valence" type="positiveInteger" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="AgeGroupEfficacy">
<sequence>
<element name="ageRange" type="tns:AgeRangeCategoryDefinition"/>
<element name="vaccineEfficacy" type="tns:Fraction"/>
</sequence>
</complexType>
<complexType name="VaccineContraindications">
<sequence>
<element name="infants" type="boolean" maxOccurs="1" minOccurs="0"/>
<element name="preschoolers" type="boolean" maxOccurs="1" minOccurs="0"/>
<element name="schoolAgeChildren" type="boolean" maxOccurs="1" minOccurs="0"/>
<element name="youngAdults" type="boolean" maxOccurs="1" minOccurs="0"/>
<element name="olderAdults" type="boolean" maxOccurs="1" minOccurs="0"/>
<element name="elderly" type="boolean" maxOccurs="1" minOccurs="0"/>
<element name="pregnantAdultsRestricted" type="boolean" maxOccurs="1" minOccurs="0"/>
</sequence>
</complexType>
<complexType name="AntiviralTreatment">
<complexContent>
<extension base="tns:Treatment">
<sequence>
<element name="antiviralId" type="token" maxOccurs="1" minOccurs="1"/>
<element name="antiviralTreatmentEfficacy" type="tns:AntiviralTreatmentEfficacy" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="DrugTreatment">
<complexContent>
<extension base="tns:Treatment">
<sequence>
<element name="drugId" type="token" maxOccurs="1" minOccurs="1"/>
<element name="drugTreatmentEfficacy" type="tns:DrugTreatmentEfficacyForSimulatorConfiguration" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="ArrayDimensionsDefinition"/>
<complexType name="TargetPopulationDefinition">
<sequence>
<element name="ageRange" type="tns:AgeRangeCategoryDefinition" maxOccurs="1" minOccurs="0"/>
<element name="sex" type="tns:GenderEnum" maxOccurs="1" minOccurs="0"/>
<element name="diseaseOutcome" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="0"/>
<element name="otherStratification" type="tns:PopulationStratificationEnum" maxOccurs="1" minOccurs="0"/>
</sequence>
</complexType>
<complexType name="PopulationInfectionAndImmunityCensusDataCell">
<sequence>
<element name="ageRange" type="tns:AgeRangeCategoryDefinition" maxOccurs="1" minOccurs="0"/>
<element name="sex" type="tns:GenderEnum" maxOccurs="1" minOccurs="0"/>
<choice>
<element name="infectionState" type="tns:InfectionStateEnum" maxOccurs="1" minOccurs="1"/>
<element name="diseaseState" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1"/>
</choice>
<element name="fractionInState" type="tns:Fraction" maxOccurs="1" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="PopulationTreatmentCensusDataCell">
<sequence>
<element name="ageRange" type="tns:AgeRangeCategoryDefinition" maxOccurs="1" minOccurs="0"/>
<element name="sex" type="tns:GenderEnum" maxOccurs="1" minOccurs="0"/>
<element name="treatmentState" type="tns:TreatmentStateEnum" maxOccurs="1" minOccurs="1"/>
<element name="fractionInTreatmentState" type="tns:Fraction" maxOccurs="1" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="TemporalArrayDimensionsDefinition">
<complexContent>
<extension base="tns:ArrayDimensionsDefinition">
<sequence>
<element name="time" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<simpleType name="InfectionStateEnum">
<restriction base="string">
<enumeration value="susceptible"/>
<enumeration value="greaterThanOrEqualToId50Exposure"/>
<enumeration value="latent"/>
<enumeration value="infectious"/>
<enumeration value="recovered"/>
<enumeration value="immuneAndActsLikeImmune"/>
<enumeration value="immuneButActsLikeNotImmune"/>
<enumeration value="newly_sick"/>
</restriction>
</simpleType>
<simpleType name="TreatmentStateEnum">
<restriction base="string">
<enumeration value="treated"/>
<enumeration value="not_treated"/>
</restriction>
</simpleType>
<simpleType name="IndividualTreatmentEnum">
<restriction base="string">
<enumeration value="vaccination"/>
<enumeration value="antiviral_treatment"/>
</restriction>
</simpleType>
<complexType name="AgeRangeCategoryDefinition">
<complexContent>
<extension base="tns:CategoryDefinition">
<sequence>
<element name="unitOfTimeForLowerBound" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1"/>
<element name="lowerBound" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
<element name="unitOfTimeForUpperBound" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1"/>
<element name="upperBound" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="DiseaseOutcomeCategoryDefinition">
<complexContent>
<extension base="tns:CategoryDefinition">
<sequence>
<element name="diseaseOutcome" type="tns:DiseaseOutcomeEnum" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="TimeSpanCategoryDefinition">
<complexContent>
<extension base="tns:CategoryDefinition">
<sequence>
<element name="unitOfTime" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1"/>
<element name="timeZeroReference" type="tns:TimeScaleEnum" maxOccurs="1" minOccurs="1"/>
<element name="startOfTimeSpan" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
<element name="durationInTimeUnits" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="RealTimeSpanCategoryDefinition">
<complexContent>
<extension base="tns:CategoryDefinition">
<sequence>
<element name="offsetFromUtcInHours" type="integer" maxOccurs="1" minOccurs="1"/>
<element name="beginningTime" type="dateTime" maxOccurs="1" minOccurs="1"/>
<element name="endingTime" type="dateTime" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="RealDateSpanCategoryDefinition">
<complexContent>
<extension base="tns:CategoryDefinition">
<sequence>
<element name="offsetFromUtcInHours" type="integer" maxOccurs="1" minOccurs="0"/>
<element name="firstDay" type="date" maxOccurs="1" minOccurs="1"/>
<element name="lastDay" type="date" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="RealTimePointCategoryDefinition">
<complexContent>
<extension base="tns:CategoryDefinition">
<sequence>
<element name="offsetFromUtcInHours" type="integer" maxOccurs="1" minOccurs="0"/>
<element name="date" type="date" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<simpleType name="TimeScaleEnum">
<restriction base="string">
<enumeration value="simulatorTimeScale"/>
<enumeration value="decisionTimeScale"/>
<enumeration value="controlMeasureTimeScale"/>
<enumeration value="individualTreatmentTimeScale"/>
<enumeration value="epidemicTimeScale"/>
<enumeration value="gregorianCalendar"/>
</restriction>
</simpleType>
<complexType name="PlaceCategoryDefinition">
<complexContent>
<extension base="tns:CategoryDefinition">
<sequence>
<element name="place" type="tns:PlaceEnum" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="HealthcareFacilityCategoryDefinition">
<complexContent>
<extension base="tns:CategoryDefinition">
<sequence>
<element name="healthcareFacilityId" type="tns:RheaHealthcareFacilityEnum" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="IndividualMovement"/>
<complexType name="HealthcareFacilities">
<sequence>
<element name="healthcareFacilities" type="tns:HealthcareFacility" maxOccurs="unbounded" minOccurs="0"/>
</sequence>
</complexType>
<complexType name="Facility">
<sequence>
<element name="facilityId" type="tns:FacilityId" maxOccurs="1" minOccurs="1"/>
<element name="facilityType" type="tns:FacilityTypeEnum" maxOccurs="1" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="HealthcareFacility">
<complexContent>
<extension base="tns:Facility">
<sequence>
<element name="numberOfBeds" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
<element name="fractionOfPatientsDischargedToHome" type="tns:Fraction" maxOccurs="1" minOccurs="1"/>
<element name="dischargePaths" type="tns:DischargePathAndProbability" maxOccurs="unbounded" minOccurs="0"/>
<element name="dischargeDestinations" type="tns:DischargeDestinationAndProbability" maxOccurs="unbounded" minOccurs="0"/>
<element name="units" type="tns:Unit" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="SchoolFacility">
<complexContent>
<extension base="tns:Facility">
<sequence>
<element name="numberOfStudents" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
<element name="units" type="tns:Unit" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="ChickenProductionFacility">
<complexContent>
<extension base="tns:Facility">
<sequence>
<element name="capacity" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
<element name="units" type="tns:Unit" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="DischargeDestinationAndProbability">
<sequence>
<element name="dischargeDestination" type="string" maxOccurs="1" minOccurs="1"/>
<element name="probability" type="tns:Probability" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="ReceivingDestinationAndProbability">
<complexContent>
<extension base="tns:Behavior">
<sequence>
<element name="receivingDestination" type="tns:PlaceEnum" maxOccurs="1" minOccurs="1"/>
<element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
<element name="transitTime" type="tns:Duration" maxOccurs="1" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<simpleType name="RheaHealthcareFacilityEnum">
<restriction base="string">
<enumeration value="XXXX"/>
<enumeration value="YYYY"/>
</restriction>
</simpleType>
<complexType name="GenderCategoryDefinition">
<complexContent>
<extension base="tns:CategoryDefinition">
<sequence>
<element name="sex" type="tns:GenderEnum" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="SourceOfInfectionCategoryDefinition">
<complexContent>
<extension base="tns:CategoryDefinition">
<sequence>
<element name="sourceOfInfection" type="tns:SourceOfInfectionEnum" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="SimulatorTimeRange">
<sequence>
<element name="lowerBound" type="nonNegativeInteger"/>
<element name="upperBound" type="nonNegativeInteger"/>
</sequence>
</complexType>
<complexType name="TargetPriorityPopulation">
<sequence>
<element name="description" type="token" maxOccurs="1" minOccurs="1"/>
<choice>
<element name="targetPopulationDefinition" type="tns:TargetPopulationDefinition" maxOccurs="1" minOccurs="1"/>
<element name="targetPopulationEnum" type="tns:TargetPopulationEnum" maxOccurs="1" minOccurs="1"/>
</choice>
<element name="fractionOfTargetPopulationToPrioritize" type="tns:Fraction" maxOccurs="1" minOccurs="1"/>
<element name="priority" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="ControlMeasureTargetPopulationsAndPrioritization">
<sequence>
<choice>
<element name="controlMeasureNamedPrioritizationScheme" type="tns:NamedPrioritizationSchemeEnum" maxOccurs="1" minOccurs="1"/>
<element name="controlMeasureTargetPopulationsAndPrioritization" type="tns:TargetPriorityPopulation" maxOccurs="unbounded" minOccurs="1"/>
</choice>
</sequence>
</complexType>
<simpleType name="NamedPrioritizationSchemeEnum">
<restriction base="string">
<enumeration value="treat_sick_only"/>
<enumeration value="ACIP"/>
<enumeration value="HHTAP"/>
<enumeration value="HHTAP100"/>
<enumeration value="none"/>
</restriction>
</simpleType>
<complexType name="InfectiousDiseaseControlMeasure">
<complexContent>
<extension base="tns:ApolloIndexableItem">
<sequence>
<element name="description" type="string" maxOccurs="1" minOccurs="1"/>
<element name="location" type="tns:Location" maxOccurs="1" minOccurs="0"/>
<element name="controlMeasureStartTime" type="tns:TriggerDefinition" maxOccurs="unbounded" minOccurs="1"/>
<element name="controlMeasureStopTime" type="tns:TriggerDefinition" maxOccurs="unbounded" minOccurs="0"/>
<element name="controlMeasureResponseDelay" type="tns:Duration" maxOccurs="1" minOccurs="1"/>
<element name="controlMeasureStandDownDelay" type="tns:Duration" maxOccurs="1" minOccurs="1"/>
<element name="logisticalSystems" type="tns:LogisticalSystem" maxOccurs="unbounded" minOccurs="0"/>
<element name="templatedInfectiousDiseaseControlMeasureUrlsForSoftware" type="tns:TemplatedInfectiousDiseaseControlMeasureUrlForSoftware" minOccurs="0" maxOccurs="unbounded"/>
<element name="referenceId" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="TemplatedInfectiousDiseaseControlMeasureUrlForSoftware">
<sequence>
<element name="softwareIdentification" type="tns:SoftwareIdentification" minOccurs="1" maxOccurs="unbounded"/>
<element name="controlMeasureTemplateURL" type="anyURI" maxOccurs="1" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="DiseaseSurveillanceTriggerDefinition">
<complexContent>
<extension base="tns:TriggerDefinition">
<sequence>
<element name="reactiveControlMeasureTest" type="token" maxOccurs="1" minOccurs="1"/>
<element name="reactiveControlMeasureThreshold" type="int" maxOccurs="1" minOccurs="1"/>
<element name="unitOfMeasureForThreshold" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1"/>
<element name="reactiveControlMeasureOperator" type="tns:OperatorEnum" maxOccurs="1" minOccurs="1"/>
<element name="diseaseSurveillanceCapability" type="tns:DiseaseSurveillanceCapability" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="TemporalTriggerDefinition">
<complexContent>
<extension base="tns:TriggerDefinition">
<sequence>
<element name="timeScale" type="tns:TimeScaleEnum" maxOccurs="1" minOccurs="1"/>
<element name="timeSinceTimeScaleZero" type="tns:FixedDuration" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="TreatmentSurveillanceTriggerDefinition">
<complexContent>
<extension base="tns:TriggerDefinition">
<sequence>
<element name="reactiveControlMeasureTest" type="token" maxOccurs="1" minOccurs="1"/>
<element name="reactiveControlMeasureThreshold" type="int" maxOccurs="1" minOccurs="1"/>
<element name="reactiveControlMeasureOperator" type="tns:OperatorEnum" maxOccurs="1" minOccurs="1"/>
<element name="unitOfMeasureForThreshold" type="tns:UnitOfMeasureEnum" maxOccurs="1" minOccurs="1"/>
<element name="treatmentSurveillanceCapability" type="tns:TreatmentSurveillanceCapability" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="TriggerDefinition"/>
<simpleType name="TargetPopulationEnum">
<restriction base="token">
<enumeration value="all"/>
<enumeration value="members_of_the_same_household"/>
<enumeration value="newly_sick"/>
<enumeration value="household_member_of_infant"/>
<enumeration value="icuPatient"/>
<enumeration value="colonizedIcuPatient"/>
<enumeration value="colonizedWardPatient"/>
<enumeration value="colonizedLongTermCareFacilityResident"/>
</restriction>
</simpleType>
<simpleType name="PopulationStratificationEnum">
<restriction base="token">
<enumeration value="essential_workforce"/>
<enumeration value="pregnant"/>
<enumeration value="high_risk"/>
</restriction>
</simpleType>
<!-- <complexType name="GetVisualizerOutputResourcesResult"> -->
<!-- <sequence> -->
<!-- <element name="methodCallStatus" type="tns:MethodCallStatus"> -->
<!-- </element> -->
<!-- <element name="urlOutputResources" type="tns:UrlOutputResource" -->
<!-- maxOccurs="unbounded" minOccurs="0" /> -->
<!-- </sequence> -->
<!-- </complexType> -->
<!-- <complexType name="SyntheticPopulationGenerationResult"> -->
<!-- <sequence> -->
<!-- <element name="runId" type="tns:RunIdentification" /> -->
<!-- <element name="syntheticPopulationOutputResource" type="tns:UrlOutputResource" -->
<!-- maxOccurs="unbounded" minOccurs="1" /> -->
<!-- </sequence> -->
<!-- </complexType> -->
<complexType name="DiscreteNonparametricProbabilityDistribution">
<complexContent>
<extension base="tns:NonparametricProbabilityDistribution">
<sequence>
<element name="probabilityValuePairs" type="tns:ProbabilityValuePair" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="TreatmentContraindication">
<sequence>
<element name="description" type="string" maxOccurs="1" minOccurs="0"/>
<element name="simulatorReferencablePopulation" type="tns:TargetPopulationDefinition" maxOccurs="1" minOccurs="0"/>
<element name="fractionOfSimulatorReferencablePopulation" type="tns:Fraction" maxOccurs="1" minOccurs="0"/>
</sequence>
</complexType>
<complexType name="ConditionalProbabilityTable">
<sequence>
<element name="axisDefinitions" type="tns:ArrayDimensionsDefinition" maxOccurs="1" minOccurs="1"/>
<choice>
<element name="pointProbabilities" type="tns:Probability" maxOccurs="unbounded" minOccurs="1"/>
<element name="parametricDistribution" type="tns:Probability" maxOccurs="unbounded" minOccurs="1"/>
</choice>
</sequence>
</complexType>
<complexType name="Duration">
<complexContent>
<extension base="tns:ParameterValue">
<sequence>
<element name="unitOfTime" type="tns:UnitOfTimeEnum" maxOccurs="1" minOccurs="1"/>
<element name="referenceId" type="nonNegativeInteger" maxOccurs="1" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="FixedDuration">
<complexContent>
<extension base="tns:Duration">
<sequence>
<element name="value" type="tns:NonNegativeDouble" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="UncertainDuration">
<complexContent>
<extension base="tns:Duration">
<sequence>
<element name="probabilityDistribution" type="tns:ProbabilityDistribution" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="ProbabilisticParameter">
<complexContent>
<extension base="tns:ParameterValue">
<sequence>
<choice>
<element name="probability" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
<element name="probabilityDistribution" type="tns:ProbabilityDistribution" maxOccurs="1" minOccurs="1"/>
</choice>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="Treatment">
<complexContent>
<extension base="tns:ApolloIndexableItem">
<sequence>
<element name="description" type="string" maxOccurs="1" minOccurs="1"/>
<element name="speciesOfTreatedOrganism" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
<element name="pathogen" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
<element name="numDosesInTreatmentCourse" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
<element name="durationOfTreatmentCourse" type="tns:Duration" maxOccurs="1" minOccurs="1"/>
<element name="treatmentContraindications" type="tns:TreatmentContraindication" maxOccurs="unbounded" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="BayesianNetwork">
<complexContent>
<extension base="tns:ProbabilityDistribution">
<sequence>
<element name="networkStructure" type="tns:BayesianNetworkStructureType" maxOccurs="1" minOccurs="1"/>
<element name="CPTs" type="tns:ConditionalProbabilityTable" maxOccurs="unbounded" minOccurs="0"/>
<element name="PPFs" type="tns:PrototypicalProbabilityFunction" maxOccurs="unbounded" minOccurs="0"/>
<element name="GeNIE_XML" type="tns:GeNIE_XMLType" maxOccurs="1" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="TimeDefinition">
<sequence>
<element name="simulatorTime" type="int" maxOccurs="1" minOccurs="1"/>
<element name="dateTime" type="dateTime" maxOccurs="1" minOccurs="0"/>
</sequence>
</complexType>
<simpleType name="TreatmentPreventableOutcomeEnum">
<restriction base="string">
<enumeration value="infection"/>
<enumeration value="infectiousness"/>
<enumeration value="sickness requiring medical attention"/>
<enumeration value="sickness requiring intensive care"/>
<enumeration value="death"/>
</restriction>
</simpleType>
<complexType name="TreatmentEfficacy">
<sequence>
<element name="hostIdentifier" type="tns:NcbiTaxonId" maxOccurs="1" minOccurs="1"/>
<element name="strainIdentifier" type="tns:ApolloPathogenCode" maxOccurs="1" minOccurs="1"/>
<element name="forTreatmentPreventableOutcome" type="tns:TreatmentPreventableOutcomeEnum" maxOccurs="1" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="VaccinationEfficacyForSimulatorConfiguration">
<complexContent>
<extension base="tns:TreatmentEfficacy">
<sequence>
<element name="averageVaccinationEfficacy" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
<element name="vaccinationEfficacyConditionedOnAgeRange" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="0"/>
<element name="vaccinationEfficaciesConditionedOnTimeSinceMostRecentDose" type="tns:VaccinationEfficacyConditionedOnTimeSinceDose" maxOccurs="1" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="VaccinationEfficacyConditionedOnTimeSinceDose">
<sequence>
<element name="numberOfDosesAdministered" type="positiveInteger" maxOccurs="1" minOccurs="1"/>
<element name="timeIntervalLabelDefinitions" type="tns:TimeAxisCategoryLabels" maxOccurs="unbounded" minOccurs="1"/>
<element name="vaccinationEfficacyConditionedOnTimeSinceMostRecentDose" type="tns:Probability" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="VaccinationEfficacyInferred">
<complexContent>
<extension base="tns:TreatmentEfficacy">
<sequence>
<element name="inferredFromTheseStudies" type="tns:VaccinationEfficacyStudy" maxOccurs="unbounded" minOccurs="1"/>
<element name="vaccinationEfficacyModel" type="tns:BayesianNetwork" maxOccurs="1" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="VaccinationEfficacyMeasured">
<complexContent>
<extension base="tns:TreatmentEfficacy">
<sequence>
<element name="measuredEfficacyValue" type="tns:ConditionalProbabilityTable" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="VaccinationEfficacyStudy">
<sequence>
<element name="description" type="string" maxOccurs="1" minOccurs="0"/>
<element name="vaccinationPreventableOutcome" type="tns:TreatmentPreventableOutcomeEnum" maxOccurs="1" minOccurs="1"/>
<element name="vaccinationEfficacyMeasured" type="tns:VaccinationEfficacyMeasured" maxOccurs="unbounded" minOccurs="1"/>
<element name="dataSets" type="string" maxOccurs="unbounded" minOccurs="1"/>
<element name="references" type="string" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="AntiviralTreatmentEfficacy">
<complexContent>
<extension base="tns:TreatmentEfficacy">
<sequence>
<element name="efficacy" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="DrugTreatmentEfficacyForSimulatorConfiguration">
<complexContent>
<extension base="tns:TreatmentEfficacy">
<sequence>
<element name="averageDrugEfficacy" type="tns:Probability" maxOccurs="1" minOccurs="1"/>
<element name="drugEfficacyConditionedOnAgeRange" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="0"/>
<element name="drugEfficaciesConditionedOnCurrentDiseaseOutcome" type="tns:ConditionalProbabilityDistribution" maxOccurs="1" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="Ecosystem"/>
<complexType name="SyntheticEcosystem">
<sequence>
<element name="date" type="dateTime" maxOccurs="1" minOccurs="1"/>
<element name="location" type="tns:Location" maxOccurs="1" minOccurs="1"/>
<element name="populations" type="string" maxOccurs="unbounded" minOccurs="1"/>
<element name="schools" type="tns:SchoolFacility" maxOccurs="unbounded" minOccurs="0"/>
<element name="workplaces" type="tns:Facility" maxOccurs="unbounded" minOccurs="0"/>
<element name="healthcareFacilities" type="tns:HealthcareFacilities" maxOccurs="unbounded" minOccurs="0"/>
</sequence>
</complexType>
<complexType name="Households"/>
<complexType name="HouseholdsData">
<complexContent>
<extension base="tns:Households">
<sequence>
<element name="households" type="token" maxOccurs="unbounded" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="Household">
<sequence>
<element name="householdId" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
<element name="groupQuarters" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="0"/>
<element name="unrelated" type="tns:ApolloLocationCode" maxOccurs="1" minOccurs="0"/>
<element name="individualIds" type="nonNegativeInteger" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="HouseholdsPointerToData">
<complexContent>
<extension base="tns:Households">
<sequence>
<element name="url" type="anyURI" maxOccurs="unbounded" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="PointerToData">
<sequence>
<element name="dataType" type="tns:DataTypeEnum" maxOccurs="1" minOccurs="1"/>
<choice>
<element name="xmlFormat" type="anyURI" maxOccurs="1" minOccurs="1"/>
<element name="csvFormat" type="anyURI" maxOccurs="1" minOccurs="1"/>
</choice>
</sequence>
</complexType>
<complexType name="BioticEcosystem"/>
<complexType name="BioticEcosystemData">
<complexContent>
<extension base="tns:BioticEcosystem">
<sequence>
<element name="populations" type="tns:Census" maxOccurs="unbounded" minOccurs="1"/>
<element name="households" type="string" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="AbioticEcosystem"/>
<complexType name="AbioticEcosystemData">
<complexContent>
<extension base="tns:AbioticEcosystem">
<sequence>
<element name="schools" type="tns:SchoolFacility" maxOccurs="unbounded" minOccurs="0"/>
<element name="workplaces" type="token" maxOccurs="unbounded" minOccurs="0"/>
<element name="houses" type="string" maxOccurs="unbounded" minOccurs="0"/>
<element name="healthcareFacilities" type="tns:HealthcareFacility" maxOccurs="unbounded" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="BayesianNetworkStructureType"/>
<complexType name="PrototypicalProbabilityFunction"/>
<complexType name="GeNIE_XMLType">
<sequence>
<element name="theXML" type="string" maxOccurs="1" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="TimeAxisCategoryLabels">
<sequence>
<element name="label" type="token" maxOccurs="1" minOccurs="1"/>
<element name="simulatorTimeEarliest" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
<element name="simulatorTimeLatest" type="nonNegativeInteger" maxOccurs="1" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="LocationDefinition">
<sequence>
<element name="locationsIncluded" type="tns:ApolloLocationCode" maxOccurs="unbounded" minOccurs="1"/>
<element name="locationsExcluded" type="tns:ApolloLocationCode" maxOccurs="unbounded" minOccurs="0"/>
<element name="multiGeometries" type="tns:MultiGeometry" maxOccurs="unbounded" minOccurs="0"/>
</sequence>
</complexType>
<complexType name="LibraryItem">
<sequence>
<element name="base_type" type="string"/>
</sequence>
</complexType>
<complexType name="UtilityFunction">
<sequence>
<element name="lambdaFunction" type="string" maxOccurs="1" minOccurs="1"/>
<choice>
<element name="textDescription" type="string" maxOccurs="1" minOccurs="1"/>
</choice>
</sequence>
</complexType>
<complexType name="SensitivityAnalysisSpecification" />
<complexType name="SensitivityAnalysisResult"/>
<complexType name="InfectiousDiseaseControlDecisionModel">
<complexContent>
<extension base="tns:ApolloIndexableItem">
<sequence>
<element name="controlStrategyAlternatives" type="tns:InfectiousDiseaseControlStrategy" maxOccurs="unbounded" minOccurs="1"/>
<element name="diseaseTransmissionModelChanceNode" type="tns:ModelIdAndProbability" maxOccurs="unbounded" minOccurs="1"/>
<element name="infectiousDiseaseScenarioWithoutIntervention" type="tns:InfectiousDiseaseScenario" maxOccurs="1" minOccurs="1"/>
<element name="utilityFunction" type="tns:UtilityFunction" maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="SensitivityAnalysisSpecificationAndResult">
<complexContent>
<extension base="tns:ApolloIndexableItem">
<sequence>
<element name="sensitivityAnalysisSpecification" type="tns:SensitivityAnalysisSpecification"
maxOccurs="1" minOccurs="1" />
<element name="sensitivityAnalysisResult" type="tns:SensitivityAnalysisResult"
maxOccurs="1" minOccurs="1"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="InfectiousDiseaseDecisionAnalysisSpecificationAndResults">
<complexContent>
<extension base="tns:ApolloIndexableItem">
<sequence>
<element name="baseCaseDecisionModel" type="tns:InfectiousDiseaseControlDecisionModel"
maxOccurs="1" minOccurs="1"/>
<element name="baseCaseResult" type="tns:BaseCaseResult"
maxOccurs="1" minOccurs="0" />
<element name="sensitivityAnalysisSpecificationsAndResults"
type="tns:SensitivityAnalysisSpecificationAndResult" maxOccurs="unbounded"
minOccurs="0" />
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="DecisionAlternative">
<sequence>
<element name="singleStrategy" type="string"/>
<element name="combinationStrategy" type="string"/>
<element name="SequentialCombinationStrategy" type="string"/>
</sequence>
</complexType>
<complexType name="BaseCaseResult">
<sequence>
<element name="decisionAlternatives" type="tns:DecisionAlternative" maxOccurs="unbounded" minOccurs="1"/>
<element name="expectedUtilities" type="double" maxOccurs="unbounded" minOccurs="1"/>
</sequence>
</complexType>
<complexType name="InfectiousDiseaseTransmissionExperimentSpecification">
<complexContent>
<extension base="tns:ApolloIndexableItem">
<sequence>
<element name="infectiousDiseaseControlStrategies" type="tns:InfectiousDiseaseControlStrategy" maxOccurs="unbounded" minOccurs="0"/>
<element name="infectiousDiseaseTransmissionModelIds" type="tns:SoftwareIdentification" maxOccurs="unbounded" minOccurs="1"/>
<element name="infectiousDiseaseScenarioWithoutIntervention" type="tns:InfectiousDiseaseScenario" maxOccurs="1" minOccurs="1"/>
<element name="sensitivityAnalyses" type="tns:SensitivityAnalysisSpecification"
maxOccurs="unbounded" minOccurs="0"/>
</sequence>
</extension>
</complexContent>
</complexType>
<complexType name="ExpectedUtility"/>