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Convert codebase to PyMC v4 #86

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@brandonwillard brandonwillard commented May 19, 2021

This PR updates the pymc3-hmm codebase so that it works with PyMC3 v4.

  • Finish converting DiscreteMarkovChain
  • Convert FFBSStep
  • Convert TransMatConjugateStep

This requires the latest Aesara build and PyMC3 v4 at pymc-devs/pymc#4729, so don't expect the tests to pass until those available/set up.

@brandonwillard brandonwillard self-assigned this May 19, 2021
@brandonwillard brandonwillard added the enhancement New feature or request label May 19, 2021
@brandonwillard brandonwillard force-pushed the pymc-v4-updates branch 9 times, most recently from c9fb000 to 9cf1c08 Compare May 27, 2021 05:55
@brandonwillard brandonwillard force-pushed the pymc-v4-updates branch 4 times, most recently from 5ddd880 to 6557783 Compare June 2, 2021 05:41
@brandonwillard brandonwillard force-pushed the pymc-v4-updates branch 4 times, most recently from 985ae64 to 90e022a Compare August 9, 2021 22:57
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Use aesara instead of theano Speed up posterior predictive sampling
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