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how to convert Multiple file to one imzML file #6

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lujw666 opened this issue Feb 24, 2021 · 2 comments
Open

how to convert Multiple file to one imzML file #6

lujw666 opened this issue Feb 24, 2021 · 2 comments

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@lujw666
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lujw666 commented Feb 24, 2021

docker run -it --rm -v /path:/mydata alanrace/imzmlconverter:latest jimzMLConverter imzML /mydata/*.raw -c 10 10
-c how to combine file,the parameter how to fill in。

this error
Feb 24, 2021 1:01:05 AM com.alanmrace.jimzmlparser.obo.OBOTerm parse
INFO: Unknown value-type encountered 'value-type:xsd:dateTime "The allowed value-type for this CV term."' @ MS:1000747
Feb 24, 2021 1:01:05 AM com.alanmrace.jimzmlparser.obo.OBOTerm parse
INFO: Unknown value-type encountered 'value-type:xsd:dateTime "The allowed value-type for this CV term."' @ MS:1002435

@AlanRace
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AlanRace commented Mar 17, 2021

Hello,
These are just information notices, they aren't errors that will affect the conversion. What type of raw files are you trying to combine?

Thanks,

Alan

@lujw666
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lujw666 commented Mar 18, 2021

Thank,if I have 10 *.raw file ,I want convert *.raw file to imzML and combine 10 *.imzML file to one.jimzMLConverter just convert *.raw file to imzML,not combine.

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