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When did the error occur? [ ] CMake configuration (cmake / ccmake) [x] Compilation (make) [ ] Installation (make install)
Build environment
ANTs version 2.4.3
Build configuration and logs -DCMAKE_C_COMPILER:STRING="cc" -DCMAKE_CXX_COMPILER:STRING="c++" -DCMAKE_C_FLAGS:STRING="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " -DCMAKE_C_FLAGS_DEBUG:STRING="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " -DCMAKE_C_FLAGS_RELEASE:STRING="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG" -DCMAKE_CXX_FLAGS:STRING="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " -DCMAKE_CXX_FLAGS_DEBUG:STRING="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " -DCMAKE_CXX_FLAGS_RELEASE:STRING="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG" -DCMAKE_EXE_LINKER_FLAGS:STRING=" -fstack-protector-strong " -DCMAKE_MODULE_LINKER_FLAGS:STRING=" -fstack-protector-strong " -DCMAKE_SHARED_LINKER_FLAGS:STRING=" -fstack-protector-strong " -DCMAKE_INSTALL_PREFIX:PATH="/usr/local" -DCMAKE_BUILD_TYPE:STRING="Release" -DTHREADS_HAVE_PTHREAD_ARG:BOOL=YES -DCMAKE_INSTALL_RPATH_USE_LINK_PATH=YES -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DFETCHCONTENT_FULLY_DISCONNECTED:BOOL=ON -DUSE_SYSTEM_ITK:BOOL=ON -DRUN_SHORT_TESTS:BOOL=OFF -DRUN_LONG_TESTS:BOOL=OFF -DBUILD_EXAMPLES:BOOL=OFF -DBUILD_TESTING:BOOL=OFF -GNinja
===> Configuring for ants-2.4.3 ===> Performing out-of-source build /bin/mkdir -p /usr/ports/science/ants/work/.build -- The C compiler identification is Clang 14.0.5 -- The CXX compiler identification is Clang 14.0.5 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/libexec/ccache/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/libexec/ccache/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Using CCache -- Performing Test C_HAS_WARNING-Wno-uninitialized -- Performing Test C_HAS_WARNING-Wno-uninitialized - Success -- Performing Test C_HAS_WARNING-Wno-unused-parameter -- Performing Test C_HAS_WARNING-Wno-unused-parameter - Success -- Performing Test C_HAS_WARNING-Wall -- Performing Test C_HAS_WARNING-Wall - Success -- Performing Test C_HAS_WARNING-Wno-long-double -- Performing Test C_HAS_WARNING-Wno-long-double - Failed -- Performing Test C_HAS_WARNING-Wcast-align -- Performing Test C_HAS_WARNING-Wcast-align - Success -- Performing Test C_HAS_WARNING-Wdisabled-optimization -- Performing Test C_HAS_WARNING-Wdisabled-optimization - Success -- Performing Test C_HAS_WARNING-Wextra -- Performing Test C_HAS_WARNING-Wextra - Success -- Performing Test C_HAS_WARNING-Wformat_2 -- Performing Test C_HAS_WARNING-Wformat_2 - Success -- Performing Test C_HAS_WARNING-Winvalid-pch -- Performing Test C_HAS_WARNING-Winvalid-pch - Success -- Performing Test C_HAS_WARNING-Wno-format-nonliteral -- Performing Test C_HAS_WARNING-Wno-format-nonliteral - Success -- Performing Test C_HAS_WARNING-Wpointer-arith -- Performing Test C_HAS_WARNING-Wpointer-arith - Success -- Performing Test C_HAS_WARNING-Wshadow -- Performing Test C_HAS_WARNING-Wshadow - Success -- Performing Test C_HAS_WARNING-Wunused -- Performing Test C_HAS_WARNING-Wunused - Success -- Performing Test C_HAS_WARNING-Wwrite-strings -- Performing Test C_HAS_WARNING-Wwrite-strings - Success -- Performing Test C_HAS_WARNING-funit-at-a-time -- Performing Test C_HAS_WARNING-funit-at-a-time - Success -- Performing Test C_HAS_WARNING-Wno-strict-overflow -- Performing Test C_HAS_WARNING-Wno-strict-overflow - Success -- Performing Test CXX_HAS_WARNING-Wall -- Performing Test CXX_HAS_WARNING-Wall - Success -- Performing Test CXX_HAS_WARNING-Wno-long-double -- Performing Test CXX_HAS_WARNING-Wno-long-double - Failed -- Performing Test CXX_HAS_WARNING-Wcast-align -- Performing Test CXX_HAS_WARNING-Wcast-align - Success -- Performing Test CXX_HAS_WARNING-Wdisabled-optimization -- Performing Test CXX_HAS_WARNING-Wdisabled-optimization - Success -- Performing Test CXX_HAS_WARNING-Wextra -- Performing Test CXX_HAS_WARNING-Wextra - Success -- Performing Test CXX_HAS_WARNING-Wformat_2 -- Performing Test CXX_HAS_WARNING-Wformat_2 - Success -- Performing Test CXX_HAS_WARNING-Winvalid-pch -- Performing Test CXX_HAS_WARNING-Winvalid-pch - Success -- Performing Test CXX_HAS_WARNING-Wno-format-nonliteral -- Performing Test CXX_HAS_WARNING-Wno-format-nonliteral - Success -- Performing Test CXX_HAS_WARNING-Wpointer-arith -- Performing Test CXX_HAS_WARNING-Wpointer-arith - Success -- Performing Test CXX_HAS_WARNING-Wshadow -- Performing Test CXX_HAS_WARNING-Wshadow - Success -- Performing Test CXX_HAS_WARNING-Wunused -- Performing Test CXX_HAS_WARNING-Wunused - Success -- Performing Test CXX_HAS_WARNING-Wwrite-strings -- Performing Test CXX_HAS_WARNING-Wwrite-strings - Success -- Performing Test CXX_HAS_WARNING-funit-at-a-time -- Performing Test CXX_HAS_WARNING-funit-at-a-time - Success -- Performing Test CXX_HAS_WARNING-Wno-strict-overflow -- Performing Test CXX_HAS_WARNING-Wno-strict-overflow - Success -- Performing Test CXX_HAS_WARNING-Wno-deprecated -- Performing Test CXX_HAS_WARNING-Wno-deprecated - Success -- Performing Test CXX_HAS_WARNING-Wno-invalid-offsetof -- Performing Test CXX_HAS_WARNING-Wno-invalid-offsetof - Success -- Performing Test CXX_HAS_WARNING-Wno-undefined-var-template -- Performing Test CXX_HAS_WARNING-Wno-undefined-var-template - Success -- Performing Test CXX_HAS_WARNING-Woverloaded-virtual -- Performing Test CXX_HAS_WARNING-Woverloaded-virtual - Success -- Performing Test CXX_HAS_WARNING-Wstrict-null-sentinel -- Performing Test CXX_HAS_WARNING-Wstrict-null-sentinel - Failed -- Performing Test C_HAS_WARNING-mtune_native -- Performing Test C_HAS_WARNING-mtune_native - Success -- Performing Test C_HAS_WARNING-march_corei7 -- Performing Test C_HAS_WARNING-march_corei7 - Success -- Performing Test CXX_HAS_WARNING-mtune_native -- Performing Test CXX_HAS_WARNING-mtune_native - Success -- Performing Test CXX_HAS_WARNING-march_corei7 -- Performing Test CXX_HAS_WARNING-march_corei7 - Success -- Found Git: /usr/local/bin/git (found version "2.38.1") -- SuperBuild - ANTS => Requires ITKv5, -- SuperBuild - ITKv5[OK] USING the system ITK, set ITK_DIR=/usr/local/lib/cmake/ITK-5.2 -- SuperBuild - ANTS[OK] -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_INSTALL_RPATH_USE_LINK_PATH CMAKE_VERBOSE_MAKEFILE FETCHCONTENT_FULLY_DISCONNECTED THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /usr/ports/science/ants/work/.build ===> Building for ants-2.4.3 [ 5% 1/17] cd /usr/ports/science/ants/work/.build && /usr/local/bin/cmake -Dcfgdir= -P /usr/ports/science/ants/work/.build/ITKv5-prefix/tmp/ITKv5-mkdirs.cmake && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ITKv5-prefix/src/ITKv5-stamp/ITKv5-mkdir [ 11% 2/17] cd /usr/ports/science/ants/work/.build/ITKv5-prefix/src && /usr/local/bin/cmake -E echo_append && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ITKv5-prefix/src/ITKv5-stamp/ITKv5-download [ 17% 3/17] cd /usr/ports/science/ants/work/.build && /usr/local/bin/cmake -E echo_append && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ITKv5-prefix/src/ITKv5-stamp/ITKv5-update [ 23% 4/17] cd /usr/ports/science/ants/work/.build && /usr/local/bin/cmake -E echo_append && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ITKv5-prefix/src/ITKv5-stamp/ITKv5-patch [ 29% 5/17] cd /usr/ports/science/ants/work/.build/EMPTY_ITKv5-build && /usr/local/bin/cmake -E echo_append && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ITKv5-prefix/src/ITKv5-stamp/ITKv5-configure [ 35% 6/17] cd /usr/ports/science/ants/work/.build/EMPTY_ITKv5-build && /usr/local/bin/cmake -E echo_append && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ITKv5-prefix/src/ITKv5-stamp/ITKv5-build [ 41% 7/17] cd /usr/ports/science/ants/work/.build/EMPTY_ITKv5-build && /usr/local/bin/cmake -E echo_append && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ITKv5-prefix/src/ITKv5-stamp/ITKv5-install [ 47% 8/17] cd /usr/ports/science/ants/work/.build && /usr/local/bin/cmake -E make_directory /usr/ports/science/ants/work/.build/CMakeFiles && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/CMakeFiles/ITKv5-complete && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ITKv5-prefix/src/ITKv5-stamp/ITKv5-done [ 52% 9/17] cd /usr/ports/science/ants/work/.build && /usr/local/bin/cmake -Dcfgdir= -P /usr/ports/science/ants/work/.build/ANTS-prefix/tmp/ANTS-mkdirs.cmake && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ANTS-prefix/src/ANTS-stamp/ANTS-mkdir [ 58% 10/17] cd /usr/ports/science/ants/work/.build/ANTS-prefix/src && /usr/local/bin/cmake -E echo_append && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ANTS-prefix/src/ANTS-stamp/ANTS-download [ 64% 11/17] cd /usr/ports/science/ants/work/.build && /usr/local/bin/cmake -E echo_append && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ANTS-prefix/src/ANTS-stamp/ANTS-update [ 70% 12/17] cd /usr/ports/science/ants/work/.build && /usr/local/bin/cmake -E echo_append && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ANTS-prefix/src/ANTS-stamp/ANTS-patch [ 76% 13/17] cd /usr/ports/science/ants/work/.build/ANTS-build && /usr/local/bin/cmake --no-warn-unused-cli -DUSE_VTK:BOOL=OFF -DCMAKE_BUILD_TYPE:PATH=Release -DMAKECOMMAND:STRING= -DCMAKE_SKIP_RPATH:BOOL=NO -DCMAKE_BUILD_TYPE:STRING=Release -DBUILD_SHARED_LIBS:BOOL=OFF -DCMAKE_CXX_COMPILER:PATH=/usr/local/libexec/ccache/c++ "-DCMAKE_CXX_FLAGS_RELEASE:STRING=-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG" "-DCMAKE_CXX_FLAGS_DEBUG:STRING=-O2 -pipe -fstack-protector-strong -fno-strict-aliasing" "-DCMAKE_CXX_FLAGS:STRING=-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -march=corei7 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual" -DCMAKE_C_COMPILER:PATH=/usr/local/libexec/ccache/cc "-DCMAKE_C_FLAGS_RELEASE:STRING=-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG" "-DCMAKE_C_FLAGS_DEBUG:STRING=-O2 -pipe -fstack-protector-strong -fno-strict-aliasing" "-DCMAKE_C_FLAGS:STRING=-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -march=corei7 -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow" "-DCMAKE_SHARED_LINKER_FLAGS:STRING= -fstack-protector-strong" "-DCMAKE_EXE_LINKER_FLAGS:STRING= -fstack-protector-strong" "-DCMAKE_MODULE_LINKER_FLAGS:STRING= -fstack-protector-strong" -DCMAKE_GENERATOR:STRING=Ninja -DCMAKE_EXTRA_GENERATOR:STRING= -DCMAKE_INSTALL_LIBDIR:STRING=lib -DCMAKE_INSTALL_PREFIX:PATH=/usr/local -DCMAKE_LIBRARY_OUTPUT_DIRECTORY:PATH= -DCMAKE_ARCHIVE_OUTPUT_DIRECTORY:PATH= -DCMAKE_RUNTIME_OUTPUT_DIRECTORY:PATH= -DCMAKE_BUNDLE_OUTPUT_DIRECTORY:PATH= -DCTEST_NEW_FORMAT:BOOL= -DMEMORYCHECK_COMMAND_OPTIONS:STRING= -DMEMORYCHECK_COMMAND:PATH= "-DCMAKE_SHARED_LINKER_FLAGS:STRING= -fstack-protector-strong" "-DCMAKE_EXE_LINKER_FLAGS:STRING= -fstack-protector-strong" "-DCMAKE_MODULE_LINKER_FLAGS:STRING= -fstack-protector-strong" -DSITE:STRING= -DBUILDNAME:STRING= -DCMAKE_SH:BOOL= -DC_LAUNCHER:STRING=/usr/local/bin/ccache -DCXX_LAUNCHER:STRING=/usr/local/bin/ccache -DCUDA_LAUNCHER:STRING=/usr/local/bin/ccache -DCMAKE_XCODE_ATTRIBUTE_CC:STRING= -DCMAKE_XCODE_ATTRIBUTE_CXX:STRING= -DCMAKE_XCODE_ATTRIBUTE_LD:STRING= -DCMAKE_XCODE_ATTRIBUTE_LDPLUSPLUS:STRING= -DCMAKE_C_COMPILER_LAUNCHER:STRING=/usr/ports/science/ants/work/.build/launch-c -DCMAKE_CXX_COMPILER_LAUNCHER:STRING=/usr/ports/science/ants/work/.build/launch-cxx -DCMAKE_CUDA_COMPILER_LAUNCHER:STRING=/usr/ports/science/ants/work/.build/launch-cuda -DUSE_SYSTEM_ITK:BOOL=ON -DUSE_SYSTEM_VTK:BOOL=OFF -DITK_DIR:PATH=/usr/local/lib/cmake/ITK-5.2 -DBUILD_EXAMPLES:BOOL=OFF -DBUILD_TESTING:BOOL=OFF -DITK_VERSION_MAJOR:STRING=5 -DITK_DIR:PATH=/usr/local/lib/cmake/ITK-5.2 -DBUILD_ALL_ANTS_APPS:BOOL=ON -DRUN_SHORT_TESTS:BOOL=OFF -DRUN_LONG_TESTS:BOOL=OFF -DOLD_BASELINE_TESTS:BOOL=OFF -DANTS_INSTALL_LIBS_ONLY:BOOL=OFF "-DANTS_C_OPTIMIZATION_FLAGS:STRING= -mtune=native -march=corei7" "-DANTS_CXX_OPTIMIZATION_FLAGS:STRING= -mtune=native -march=corei7" -DANTS_CLI_LIBRARY_OUTPUT_DIRECTORY:PATH= -DANTS_CLI_ARCHIVE_OUTPUT_DIRECTORY:PATH= -DANTS_CLI_RUNTIME_OUTPUT_DIRECTORY:PATH= -DANTS_CLI_INSTALL_LIBRARY_DESTINATION:PATH= -DANTS_CLI_INSTALL_ARCHIVE_DESTINATION:PATH= -DANTS_CLI_INSTALL_RUNTIME_DESTINATION:PATH= -DINSTALL_RUNTIME_DESTINATION:STRING= -DINSTALL_LIBRARY_DESTINATION:STRING= -DINSTALL_ARCHIVE_DESTINATION:STRING= -DANTS_SUPERBUILD:BOOL=OFF -DCMAKE_GENERATOR_PLATFORM:STRING= -GNinja /usr/ports/science/ants/work/ANTs-2.4.3 && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ANTS-prefix/src/ANTS-stamp/ANTS-configure FAILED: ANTS-prefix/src/ANTS-stamp/ANTS-configure /usr/ports/science/ants/work/.build/ANTS-prefix/src/ANTS-stamp/ANTS-configure cd /usr/ports/science/ants/work/.build/ANTS-build && /usr/local/bin/cmake --no-warn-unused-cli -DUSE_VTK:BOOL=OFF -DCMAKE_BUILD_TYPE:PATH=Release -DMAKECOMMAND:STRING= -DCMAKE_SKIP_RPATH:BOOL=NO -DCMAKE_BUILD_TYPE:STRING=Release -DBUILD_SHARED_LIBS:BOOL=OFF -DCMAKE_CXX_COMPILER:PATH=/usr/local/libexec/ccache/c++ "-DCMAKE_CXX_FLAGS_RELEASE:STRING=-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG" "-DCMAKE_CXX_FLAGS_DEBUG:STRING=-O2 -pipe -fstack-protector-strong -fno-strict-aliasing" "-DCMAKE_CXX_FLAGS:STRING=-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -march=corei7 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual" -DCMAKE_C_COMPILER:PATH=/usr/local/libexec/ccache/cc "-DCMAKE_C_FLAGS_RELEASE:STRING=-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG" "-DCMAKE_C_FLAGS_DEBUG:STRING=-O2 -pipe -fstack-protector-strong -fno-strict-aliasing" "-DCMAKE_C_FLAGS:STRING=-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -march=corei7 -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow" "-DCMAKE_SHARED_LINKER_FLAGS:STRING= -fstack-protector-strong" "-DCMAKE_EXE_LINKER_FLAGS:STRING= -fstack-protector-strong" "-DCMAKE_MODULE_LINKER_FLAGS:STRING= -fstack-protector-strong" -DCMAKE_GENERATOR:STRING=Ninja -DCMAKE_EXTRA_GENERATOR:STRING= -DCMAKE_INSTALL_LIBDIR:STRING=lib -DCMAKE_INSTALL_PREFIX:PATH=/usr/local -DCMAKE_LIBRARY_OUTPUT_DIRECTORY:PATH= -DCMAKE_ARCHIVE_OUTPUT_DIRECTORY:PATH= -DCMAKE_RUNTIME_OUTPUT_DIRECTORY:PATH= -DCMAKE_BUNDLE_OUTPUT_DIRECTORY:PATH= -DCTEST_NEW_FORMAT:BOOL= -DMEMORYCHECK_COMMAND_OPTIONS:STRING= -DMEMORYCHECK_COMMAND:PATH= "-DCMAKE_SHARED_LINKER_FLAGS:STRING= -fstack-protector-strong" "-DCMAKE_EXE_LINKER_FLAGS:STRING= -fstack-protector-strong" "-DCMAKE_MODULE_LINKER_FLAGS:STRING= -fstack-protector-strong" -DSITE:STRING= -DBUILDNAME:STRING= -DCMAKE_SH:BOOL= -DC_LAUNCHER:STRING=/usr/local/bin/ccache -DCXX_LAUNCHER:STRING=/usr/local/bin/ccache -DCUDA_LAUNCHER:STRING=/usr/local/bin/ccache -DCMAKE_XCODE_ATTRIBUTE_CC:STRING= -DCMAKE_XCODE_ATTRIBUTE_CXX:STRING= -DCMAKE_XCODE_ATTRIBUTE_LD:STRING= -DCMAKE_XCODE_ATTRIBUTE_LDPLUSPLUS:STRING= -DCMAKE_C_COMPILER_LAUNCHER:STRING=/usr/ports/science/ants/work/.build/launch-c -DCMAKE_CXX_COMPILER_LAUNCHER:STRING=/usr/ports/science/ants/work/.build/launch-cxx -DCMAKE_CUDA_COMPILER_LAUNCHER:STRING=/usr/ports/science/ants/work/.build/launch-cuda -DUSE_SYSTEM_ITK:BOOL=ON -DUSE_SYSTEM_VTK:BOOL=OFF -DITK_DIR:PATH=/usr/local/lib/cmake/ITK-5.2 -DBUILD_EXAMPLES:BOOL=OFF -DBUILD_TESTING:BOOL=OFF -DITK_VERSION_MAJOR:STRING=5 -DITK_DIR:PATH=/usr/local/lib/cmake/ITK-5.2 -DBUILD_ALL_ANTS_APPS:BOOL=ON -DRUN_SHORT_TESTS:BOOL=OFF -DRUN_LONG_TESTS:BOOL=OFF -DOLD_BASELINE_TESTS:BOOL=OFF -DANTS_INSTALL_LIBS_ONLY:BOOL=OFF "-DANTS_C_OPTIMIZATION_FLAGS:STRING= -mtune=native -march=corei7" "-DANTS_CXX_OPTIMIZATION_FLAGS:STRING= -mtune=native -march=corei7" -DANTS_CLI_LIBRARY_OUTPUT_DIRECTORY:PATH= -DANTS_CLI_ARCHIVE_OUTPUT_DIRECTORY:PATH= -DANTS_CLI_RUNTIME_OUTPUT_DIRECTORY:PATH= -DANTS_CLI_INSTALL_LIBRARY_DESTINATION:PATH= -DANTS_CLI_INSTALL_ARCHIVE_DESTINATION:PATH= -DANTS_CLI_INSTALL_RUNTIME_DESTINATION:PATH= -DINSTALL_RUNTIME_DESTINATION:STRING= -DINSTALL_LIBRARY_DESTINATION:STRING= -DINSTALL_ARCHIVE_DESTINATION:STRING= -DANTS_SUPERBUILD:BOOL=OFF -DCMAKE_GENERATOR_PLATFORM:STRING= -GNinja /usr/ports/science/ants/work/ANTs-2.4.3 && /usr/local/bin/cmake -E touch /usr/ports/science/ants/work/.build/ANTS-prefix/src/ANTS-stamp/ANTS-configure Not searching for unused variables given on the command line. -- The CXX compiler identification is Clang 14.0.5 -- The C compiler identification is Clang 14.0.5 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/libexec/ccache/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/libexec/ccache/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Using CCache -- Performing Test C_HAS_WARNING-Wno-uninitialized -- Performing Test C_HAS_WARNING-Wno-uninitialized - Success -- Performing Test C_HAS_WARNING-Wno-unused-parameter -- Performing Test C_HAS_WARNING-Wno-unused-parameter - Success -- Performing Test C_HAS_WARNING-Wall -- Performing Test C_HAS_WARNING-Wall - Success -- Performing Test C_HAS_WARNING-Wno-long-double -- Performing Test C_HAS_WARNING-Wno-long-double - Failed -- Performing Test C_HAS_WARNING-Wcast-align -- Performing Test C_HAS_WARNING-Wcast-align - Success -- Performing Test C_HAS_WARNING-Wdisabled-optimization -- Performing Test C_HAS_WARNING-Wdisabled-optimization - Success -- Performing Test C_HAS_WARNING-Wextra -- Performing Test C_HAS_WARNING-Wextra - Success -- Performing Test C_HAS_WARNING-Wformat_2 -- Performing Test C_HAS_WARNING-Wformat_2 - Success -- Performing Test C_HAS_WARNING-Winvalid-pch -- Performing Test C_HAS_WARNING-Winvalid-pch - Success -- Performing Test C_HAS_WARNING-Wno-format-nonliteral -- Performing Test C_HAS_WARNING-Wno-format-nonliteral - Success -- Performing Test C_HAS_WARNING-Wpointer-arith -- Performing Test C_HAS_WARNING-Wpointer-arith - Success -- Performing Test C_HAS_WARNING-Wshadow -- Performing Test C_HAS_WARNING-Wshadow - Success -- Performing Test C_HAS_WARNING-Wunused -- Performing Test C_HAS_WARNING-Wunused - Success -- Performing Test C_HAS_WARNING-Wwrite-strings -- Performing Test C_HAS_WARNING-Wwrite-strings - Success -- Performing Test C_HAS_WARNING-funit-at-a-time -- Performing Test C_HAS_WARNING-funit-at-a-time - Success -- Performing Test C_HAS_WARNING-Wno-strict-overflow -- Performing Test C_HAS_WARNING-Wno-strict-overflow - Success -- Performing Test CXX_HAS_WARNING-Wall -- Performing Test CXX_HAS_WARNING-Wall - Success -- Performing Test CXX_HAS_WARNING-Wno-long-double -- Performing Test CXX_HAS_WARNING-Wno-long-double - Failed -- Performing Test CXX_HAS_WARNING-Wcast-align -- Performing Test CXX_HAS_WARNING-Wcast-align - Success -- Performing Test CXX_HAS_WARNING-Wdisabled-optimization -- Performing Test CXX_HAS_WARNING-Wdisabled-optimization - Success -- Performing Test CXX_HAS_WARNING-Wextra -- Performing Test CXX_HAS_WARNING-Wextra - Success -- Performing Test CXX_HAS_WARNING-Wformat_2 -- Performing Test CXX_HAS_WARNING-Wformat_2 - Success -- Performing Test CXX_HAS_WARNING-Winvalid-pch -- Performing Test CXX_HAS_WARNING-Winvalid-pch - Success -- Performing Test CXX_HAS_WARNING-Wno-format-nonliteral -- Performing Test CXX_HAS_WARNING-Wno-format-nonliteral - Success -- Performing Test CXX_HAS_WARNING-Wpointer-arith -- Performing Test CXX_HAS_WARNING-Wpointer-arith - Success -- Performing Test CXX_HAS_WARNING-Wshadow -- Performing Test CXX_HAS_WARNING-Wshadow - Success -- Performing Test CXX_HAS_WARNING-Wunused -- Performing Test CXX_HAS_WARNING-Wunused - Success -- Performing Test CXX_HAS_WARNING-Wwrite-strings -- Performing Test CXX_HAS_WARNING-Wwrite-strings - Success -- Performing Test CXX_HAS_WARNING-funit-at-a-time -- Performing Test CXX_HAS_WARNING-funit-at-a-time - Success -- Performing Test CXX_HAS_WARNING-Wno-strict-overflow -- Performing Test CXX_HAS_WARNING-Wno-strict-overflow - Success -- Performing Test CXX_HAS_WARNING-Wno-deprecated -- Performing Test CXX_HAS_WARNING-Wno-deprecated - Success -- Performing Test CXX_HAS_WARNING-Wno-invalid-offsetof -- Performing Test CXX_HAS_WARNING-Wno-invalid-offsetof - Success -- Performing Test CXX_HAS_WARNING-Wno-undefined-var-template -- Performing Test CXX_HAS_WARNING-Wno-undefined-var-template - Success -- Performing Test CXX_HAS_WARNING-Woverloaded-virtual -- Performing Test CXX_HAS_WARNING-Woverloaded-virtual - Success -- Performing Test CXX_HAS_WARNING-Wstrict-null-sentinel -- Performing Test CXX_HAS_WARNING-Wstrict-null-sentinel - Failed CMake Warning at CMake/ProjectSourceVersion.cmake:56 (message): git tag: "-128-NOTFOUND" does not match expected version format! Call Stack (most recent call first): Version.cmake:10 (include) ANTS.cmake:19 (include) CMakeLists.txt:75 (include) -- Building ANTS version "v2.4.3.dev1-gb41b467" -- antsAffineInitializer -- antsJointFusion -- DenoiseImage -- SurfaceBasedSmoothing -- ThresholdImage -- ResampleImage -- sccan -- N4BiasFieldCorrection -- N3BiasFieldCorrection -- KellyKapowski -- antsRegistration -- antsMotionCorrStats -- antsMotionCorr -- antsApplyTransforms -- LabelGeometryMeasures -- LabelClustersUniquely -- Atropos -- antsApplyTransformsToPoints -- antsAI -- ANTSIntegrateVelocityField -- antsJointTensorFusion -- ImageMath -- iMath -- AddNoiseToImage -- ANTS -- ANTSJacobian -- CreateJacobianDeterminantImage -- PrintHeader -- ResetDirection -- ANTSUseLandmarkImagesToGetAffineTransform -- ANTSUseLandmarkImagesToGetBSplineDisplacementField -- ANTSUseDeformationFieldToGetAffineTransform -- antsLandmarkBasedTransformInitializer -- LaplacianThickness -- SetOrigin -- SetSpacing -- SetDirectionByMatrix -- SurfaceCurvature -- ConvertScalarImageToRGB -- CreateWarpedGridImage -- MeasureImageSimilarity -- ConvertToJpg -- ConvertImage -- ConvertImagePixelType -- ConvertInputImagePixelTypeToFloat -- FitBSplineToPoints -- AverageTensorImages -- ImageSetStatistics -- MultiplyImages -- SimulateDisplacementField -- SmoothDisplacementField -- SmoothImage -- ClusterImageStatistics -- LabelOverlapMeasures -- LesionFilling -- MeasureMinMaxMean -- WarpImageMultiTransform -- ComposeMultiTransform -- MemoryTest -- PermuteFlipImageOrientationAxes -- ImageCompare -- ResampleImageBySpacing -- CopyImageHeaderInformation -- WarpTimeSeriesImageMultiTransform -- ExtractSliceFromImage -- ExtractRegionFromImage -- ExtractRegionFromImageByMask -- PasteImageIntoImage -- TileImages -- CreateTiledMosaic -- CreateImage -- NonLocalSuperResolution -- WarpTensorImageMultiTransform -- ReorientTensorImage -- RebaseTensorImage -- KellySlater -- CreateDTICohort -- antsAlignOrigin -- antsMotionCorrDiffusionDirection -- antsSliceRegularizedRegistration -- ANTSIntegrateVectorField -- antsTransformInfo -- antsUtilitiesTesting -- AverageAffineTransform -- AverageAffineTransformNoRigid -- AverageImages -- simpleSynRegistration -- CompositeTransformUtil -- CreateDisplacementField -- ConvertTransformFile -- compareTwoTransforms -- SuperResolution -- TimeSCCAN -- TextureCooccurrenceFeatures -- TextureRunLengthFeatures -- ImageIntensityStatistics -- GetConnectedComponentsFeatureImages -- DeNrrd -- StackSlices -- Configuring done CMake Error at Examples/CMakeLists.txt:15 (target_link_libraries): Target "antsUtilities" links to: GTest::GTest but the target was not found. Possible reasons include: * There is a typo in the target name. * A find_package call is missing for an IMPORTED target. * An ALIAS target is missing.
Additional context ITK's cmake scripts add GTest::GTest into the required targets without finding GTest.
The text was updated successfully, but these errors were encountered:
InsightSoftwareConsortium/ITK#3750
The suggested solution there was to turn off the core group and then turn on all the modules except the testing kernel.
https://itk.org/Doxygen/html/group__Group-Core.html
ANTs might build with that but I don't know.
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When did the error occur?
[ ] CMake configuration (cmake / ccmake)
[x] Compilation (make)
[ ] Installation (make install)
Build environment
ANTs version
2.4.3
Build configuration and logs
-DCMAKE_C_COMPILER:STRING="cc" -DCMAKE_CXX_COMPILER:STRING="c++" -DCMAKE_C_FLAGS:STRING="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " -DCMAKE_C_FLAGS_DEBUG:STRING="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " -DCMAKE_C_FLAGS_RELEASE:STRING="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG" -DCMAKE_CXX_FLAGS:STRING="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " -DCMAKE_CXX_FLAGS_DEBUG:STRING="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " -DCMAKE_CXX_FLAGS_RELEASE:STRING="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG" -DCMAKE_EXE_LINKER_FLAGS:STRING=" -fstack-protector-strong " -DCMAKE_MODULE_LINKER_FLAGS:STRING=" -fstack-protector-strong " -DCMAKE_SHARED_LINKER_FLAGS:STRING=" -fstack-protector-strong " -DCMAKE_INSTALL_PREFIX:PATH="/usr/local" -DCMAKE_BUILD_TYPE:STRING="Release" -DTHREADS_HAVE_PTHREAD_ARG:BOOL=YES -DCMAKE_INSTALL_RPATH_USE_LINK_PATH=YES -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DFETCHCONTENT_FULLY_DISCONNECTED:BOOL=ON -DUSE_SYSTEM_ITK:BOOL=ON -DRUN_SHORT_TESTS:BOOL=OFF -DRUN_LONG_TESTS:BOOL=OFF -DBUILD_EXAMPLES:BOOL=OFF -DBUILD_TESTING:BOOL=OFF -GNinja
Additional context
ITK's cmake scripts add GTest::GTest into the required targets without finding GTest.
The text was updated successfully, but these errors were encountered: