affymetrix
Here are 23 public repositories matching this topic...
Microarray Analysis of Differential Expression
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Apr 7, 2016 - R
Find shared SNPs between different microarray chips
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Mar 27, 2018 - Shell
Various python programs I use for the manipulation of SNP genotype datasets and other bioinformatics tasks. This repository features miscellaneous scripts to help work efficiently in common bioinformatics tasks I encounter. Use at own risk
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Apr 6, 2018 - Python
Gene expression experiments using Python and R
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Apr 13, 2018 - HTML
R scripts & functions for SNP data analysis of genotyping data from Affymetrix Axiom arrays
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Jun 1, 2018 - R
Affymetrix GenomeWideSNP_6 processing using apt-copynumber-workflow (1.20.0)
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Dec 6, 2018 - R
Affymetrix OncoScan / OncoScan_CNV processing using apt-copynumber-onco-ssa (2.4.0)
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Dec 6, 2018 - R
Affymetrix CytoScan (750k / HD) processing using apt-copynumber-cyto-ssa (2.4.0)
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Dec 6, 2018 - R
A collection of miscellaneous bioinformatics scripts
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Feb 28, 2020 - Smalltalk
App to illustrate the history of transcript cluster annotations of the Affy array HTA2.0
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May 28, 2020 - R
Creates a GCT file from a set of CEL files from Affymetrix ST arrays.
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Jul 26, 2021 - R
Analysis of gene expression in umbilical cord blood from ASD, Non-TD, and TD subjects in the MARBLES and EARLI studies
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Jan 12, 2022 - R
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Jun 13, 2022 - R
Differential Expression Analysis Pipeline
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Apr 28, 2024 - Python
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Sep 28, 2023 - R
Source code of the Bgee pipeline used to build the Bgee database
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May 22, 2024 - Perl
read Affymetrix .CEL files
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Feb 11, 2024 - Julia
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