🎧 Papers discussed on various shows on MicrobeTV
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Updated
Nov 8, 2020 - TeX
🎧 Papers discussed on various shows on MicrobeTV
SARS2seq is a pipeline designed to process raw FastQ data from targeted SARS-CoV-2 sequencing and generate biologically correct consensus sequences of the SARS-CoV-2 genome.
hmmcluster - Hidden Markov Model clustering of nucleotide sequences. O Charles & R Goldstein.
NGS data analysis scripts for HBV elimination research group
Primer Bookdown de Virología en Español
workflow and notes on large virus genome assembly and snp call using FastQC, Trimmomatic, bowtie2, and samtools.
Database of herpesvirus antiviral resistance mutations
Automated Genomics Application for Variant Exploration (AGAVE)
Drug Resistance Genotyping of antiviral treated Herpesviruses
Circular particle counter for electron microscope images
Code and data used in Mollentze et al. (2022) "Variation in the ACE2 receptor has limited utility for SARS-CoV-2 host prediction".
SARS-CoV-2 Peptide Vaccine, Gen 11
Quality of life improvement scripts for working with https://phaster.ca (PHAge Search Tool Enhanced Release)
A Panel progressive web app for synonymous recoding of viral genomes with CpG dinucleotides
Repository for animal tracking project TRKIR
An organised catalog of endogenous viral element (EVE) sequences identified via database-integrated genome screening (DIGS).
A web tool for recombination events analysis in viral genomes. Django based version of recan
This is a project for Northwestern's CIS395 course in DataScience. This project implements a pipeline to determine genetic distance between all coronavirus genomes contained in the NIH Coronavirus dataset.
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