A Graph Convolutional Network-based solution for PHI prediction.
-
Updated
Sep 21, 2022 - Python
A Graph Convolutional Network-based solution for PHI prediction.
Prediction of protein-protein interaction between anti-crispr protein (acr) and CRISPR-associated (cas) protein using machine learning algorithm
Protein Protein Interaction Analysis With The Help Of Data Science And Machine Learning. ( Hubs: PARKIN,PINK1,DJ1 )
Post-acquisition targeted search (PATS) by Yu (Tom) Gao @ Yates Lab
Jupyter notebooks for BFG-PCA related simulation and analysis.
This code was written and used to perform the comparative interactome analysis of β-arrestin1 and 2.
Measuring gene pleiotropy through Gene Ontologies and Protein Interactions
InteractoMIX: a suite of computational tools to exploit interactomes in biological and clinical research.
This repository contains codes for the regeneration of figures 3b and 3g in Tam, C., Kukimoto-Niino, M., Miyata-Yabuki, Y. et al. Targeting Ras-binding domain of ELMO1 by computational nanobody design. Commun Biol 6, 284 (2023).
A python solution towards classifying different protein-protein interactions among Protein Sequences.
A tool for calculating PPI network rewiring due to alternative splicing
Backend for the EvoPPI application
Comprehensive human PPI network and TF network
PlantPathoPPI: An Ensemble-based Machine Learning Architecture for Prediction of Protein-Protein Interactions between Plants and Pathogens
Project for the Advanced Genomics course of "Bioinformatics for Computational Genomics" MSc
Incorporating Triplet Error for Predicting PPIs using Deep Learning
Analysis of AP-MS data
A method designed for proteome-scale sequence-based evaluation of protein-protein interfaces as defined by structural models of protein-protein interaction complexes.
A novel insight into neurological disorders through HDAC6 protein-protein interactions
Reads protein functional associations (e.g. from STRING-DB) and finds direct (0-hops) or indirect (1,2-hops) protein-links between a pair of proteins (C/C++).This work was done while working at the Institute of Cancer Research in London in association with people from the Erler Lab.
Add a description, image, and links to the protein-protein-interaction topic page so that developers can more easily learn about it.
To associate your repository with the protein-protein-interaction topic, visit your repo's landing page and select "manage topics."