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I happened to notice that the pathnames in your .Rmd files are absolute, but should be relative when possible.
What you could do is have a script parameter such as rss.path, and then set, for example, gsea.path <- file.path(rss.path,"Data/gwas_gsea/summarize_enrichment/round2_pathway/"). Just a small comment.
The text was updated successfully, but these errors were encountered:
From Peter:
The text was updated successfully, but these errors were encountered: