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Support queries to find all proteins that interact with a given protein #14

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webyrd opened this issue Apr 13, 2018 · 3 comments
Open

Support queries to find all proteins that interact with a given protein #14

webyrd opened this issue Apr 13, 2018 · 3 comments

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@webyrd
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webyrd commented Apr 13, 2018

For example, find all human proteins that are known to interact with a given human protein.

(Feature request from a clinical researcher.)
@webyrd
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webyrd commented Apr 13, 2018 •
edited

The Human Protein Reference Database seems to be one useful source of this information:

http://hprd.org/index_html

Update: Andrew Su points out that HPRD hasn't been updated since 2010.

@webyrd
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webyrd commented Apr 13, 2018

List of protein-protein interaction data sources:

http://mips.helmholtz-muenchen.de/proj/ppi/

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webyrd commented Apr 13, 2018

Andrew Su recommends this data source for PPI:

https://thebiogrid.org/

which is part of NCATS Data Translator.

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