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I tried executing the read2sdbg on Mac (2.3 Quad-Core intel i5 w 16Gb RAM), but seems like the execution did not go through:
IN>> megahit_core read2sdbg --read_lib_file ERR3426146.fastq --o out --host_mem 0.9
------------------------------------------------------------------------------------------------
INFO sorting/base_engine.cpp : 148 - Preparing data...
INFO sequence/io/sequence_lib.cpp : 115 - Before reading, sizeof seq_package: 1649267441876
INFO sequence/io/sequence_lib.cpp : 117 - After reading, sizeof seq_package: 1649267441876
INFO sorting/read_to_sdbg_s1.cpp : 105 - 0 reads, 0 max read length, 0 total bases
INFO sorting/read_to_sdbg_s1.cpp : 109 - 2 words per substring
INFO sorting/read_to_sdbg_s1.cpp : 124 - Number of files for mercy candidate reads: 1
INFO sorting/base_engine.cpp : 153 - Preparing data... Done. Time elapsed: 0.0053
INFO sorting/base_engine.cpp : 156 - Preparing partitions and calculating bucket sizes...
zsh: killed megahit_core read2sdbg --read_lib_file ERR3426146.fastq --o out --host_mem 0.
Unfortunately I have no idea what is happening and how to continue... Is there any manual on specifically sdbg builder?
Best regards,
Fikrat
The text was updated successfully, but these errors were encountered:
I tried executing the read2sdbg on Mac (2.3 Quad-Core intel i5 w 16Gb RAM), but seems like the execution did not go through:
Unfortunately I have no idea what is happening and how to continue... Is there any manual on specifically
sdbg
builder?Best regards,
Fikrat
The text was updated successfully, but these errors were encountered: