% VCF2DAG(1) vcf2dag (vcflib) | vcf2dag (VCF transformation) % Erik Garrison and vcflib contributors
vcf2dag
vcf2dag [options] []
Modify VCF to be able to build a directed acyclic graph (DAG)
options:
-r, --reference FILE FASTA reference file.
Modify the VCF file so that homozygous regions are included as REF/. calls.
For each ref and alt allele, assign an index. These steps are sufficient to
enable use of the VCF as a DAG (specifically a partially-ordered graph).
Type: transformation
0 : Success
not 0 : Failure
vcflib(1)
Copyright 2011-2024 (C) Erik Garrison and vcflib contributors. MIT licensed. Copyright 2020-2024 (C) Pjotr Prins.