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coverage in Abricate #205

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Hedi65 opened this issue Jan 21, 2024 · 0 comments
Open

coverage in Abricate #205

Hedi65 opened this issue Jan 21, 2024 · 0 comments

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@Hedi65
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Hedi65 commented Jan 21, 2024

Dear developer

i was wondering how Abricate calculates coverage. we all know that BLAST reports qcovs, is it the same coverage that Abricate reports, or does simply Abricate, divide the length of alignment for each query over subject length?

thanks for your clarification

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