a core part of the MiModD package for use as a library
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Updated
Feb 6, 2018 - Python
a core part of the MiModD package for use as a library
Manuscript data and code repository
A tool for automatic classification of sequence variants according to ACMG criteria.
A flexible variant annotator written in Python
Identification of molecular markers for sports performance
A Latch Bio workflow to call DNA sequence variants
Variant annotation and filtration server ALAPY Genome Explorer
Calculate SMD and Hamming and Jaccard distances between each pair of samples in a set of variant files.
Novel mutations are identified in leukemia through variant analysis.
to analyze multiple VCF files and generate a summary of variant metrics
A repository for all code related to my masters project
Workflow for biological validation of germline SNP and indel variant datasets.
Deterministic and standard extractor of SNVs, indels and structural variants (SVs) from VCF files.
A tool for prioritising identity-by-descent (IBD) variants in Whole Genome Sequencing (WGS) data from families with rare heritable diseases.
Filter a VCF to discard false positive variants
A command line tool for predicting gene expression using genotypic data
Bioinformatics pipelines developed while working at the dept of Obs & Gynae
Skeleton for NGS pipeline, now backbone of OVAS project
bcftools for dealing with bcf files.
Organization-wide GitHub configuration
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