Extension for 3D slicer that provides a module and a python package for fiber clustering and tractography analysis.
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Updated
May 14, 2024 - Python
Extension for 3D slicer that provides a module and a python package for fiber clustering and tractography analysis.
DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.
Multi-platform, free open source software for visualization and image computing.
Processing and visualization tools for quantitative MRI data
Magnetic resonance imaging and tractography with R
Preprocessing and reconstruction of diffusion MRI
Package facilitating the tracking of sub-cortical U-Fibers
Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.
This repository contains the code of UtiliziNg tRActography to uncoVEr muLti-fixel microstructure (UNRAVEL).
Public release of Track-to-Learn: A general framework for tractography with deep reinforcement learning
A hands-free DTI, DKI, FBI and FBWM preprocessing pipeline. Information on algorithms and preprocessing steps are available at https://www.biorxiv.org/content/10.1101/2021.10.20.465189v1 A video tutorial on PyDesigner and its usage is now available at https://www.youtube.com/watch?v=mChQFuQqX3k
Easy and comprehensive assessment of predictive power, with support for neuroimaging features
MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit
Introduction to dMRI
Graph theory analysis of brain MRI data
Repo for the article "Dynamics of White Matter Architecture in Lexical Production among Middle-Aged Adults"
Generate Polarimetric Tensor Imaging (PTI) together with an Embedded DEMO for Visualisation and Interaction in 3D Slicer.
Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context
A Reproducible Workflow for Structural and Functional Connectome Ensemble Learning
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