Single cell Nanopore sequencing data for Genotype and Phenotype
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Updated
May 24, 2024 - Python
Single cell Nanopore sequencing data for Genotype and Phenotype
Tool to identify chimeric events from RNA-Seq data
An in-house bioinformatic framework for bulk RNA-seq analysis
RNA sequencing analysis software
RNA-Seq analysis pipeline for investigating transcriptional changes during mammalian cardiac regeneration.
A Snakemake pipeline to analyze RNA-seq expression data
RNA-seq pipeline automation scripts
Clair3-RNA - a long-read small variant caller for RNA sequencing data
Differential gene expression analysis for samples with replicates using STAR-DeSeq2 pipeline
pySeqRNA: a python-based package for RNASeq data analysis
Workflow for de novo transcriptome assemblies from paired-end illumina reads, annotation and quality checks
Automatic RNA-Seq Pipelines with Interactive Report
Snakemake workflow for transposable element RNA-Seq using TEtranscripts
Girirajan Lab RNA-seq analysis pipeline
Single Cell RNA-seq analysis of Persister Cells to unearth key stress pathways and core, differential genes of those respective pathways
Workflow for differential gene expression analysis for non-replicate samples using DEGseq
SPEAQeasy: portable LIBD RNA-seq pipeline using Nextflow. Check http://research.libd.org/SPEAQeasy-example/ for an example on how to use this pipeline and analyze the resulting output files.
Simple Nextflow RNA-Seq pipeline
SNP-free RNA editing Identification Toolkit
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