A bookdown project of best programmer practices for intermediate R and Python programmers
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Updated
Jan 13, 2020 - HTML
A bookdown project of best programmer practices for intermediate R and Python programmers
Code and data to recreate figures and analyses for our Scientific Reports paper "Cold exposure induces dynamic, heterogeneous alterations in human brown adipose tissue lipid content".
An R package for data archiving and linking with code
Seeking alternative stable states in a deep lake (Bruel et al 2018) — reproduce analysis.
Jupyter Notebooks to reproduce analysis with dief R package
Reproducing the results reported in a preprint during ReproHack2019 (Leiden).
A Python package for data archiving and linking with code
Python utility functions
R utility functions
Practical Guide to Reproducibility in Bioinformatics (Work In Progress)
Reproducible analysis with R, Python and Snakemake via Conda
A reproducible analysis of environmental data - from hardware to plot
Epidemiologia de Doenças de Plantas Aplicada com R
a Python toolbox for reproducible analysis and visualization of NeuroPhysiological data.
Python Citations Generator
Live code in Pandoc Markdown
TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020
Working repository to turn the COBIDAS guidelines to report methods and results in neuroimaging into a user friendly checklist
A curated list of reproducible research case studies, projects, tutorials, and media
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