Plant phenotyping with image analysis
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Updated
May 28, 2024 - Python
Plant phenotyping with image analysis
Plant Phenotyping APP
A versatile, fully open-source pipeline to extract phenotypic measurements from plant images
Regression in Convolutional Neural Network applied to Plant Leaf Count
Modular, Scalable Phenomic Data Processing Pipelines
We present here a 1D convolutional neural network model to predict grain protein content using spectroscopic data of multiple cereals
The official repository for the paper: Scalable learning for bridging the species gap in image-based plant phenotyping.
Code for taking measurements from images of an object on top of a calibration pattern.
Phenome 2020 Digital Phenotyping workshop materials
Greenotyper is a plant phenotyping tool used for detecting multiple plants on an image and measuring size and greenness of each individual plant over time.
A modular software architecture for Automatic Plant Phenotyping
A comparison of classical and machine learning-based phenotype prediction methods on simulated data and three plant species
Detecting phenotypic traits such as leaf and collar count in soybean plants using deep learning
Batch process FLIR radiometric (thermal) JPEGs and generate clean lossless images with consistent scale and palette
Header-only C++11 library using OpenCV for high-throughput image-based plant phenotyping
A repository with notes from the seminar given on 28 November 2018.
[ISPRS P&RS] Unsupervised shape-aware SOM down-sampling for plant point clouds
My Github Portfolio and CV
Code for calibrating a camera using a pattern, exif tags, and then warping to physical dimensions * a scaling factor. Originally for use in plant phenotyping.
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