A modular software architecture for Automatic Plant Phenotyping
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Updated
Nov 21, 2019 - C++
A modular software architecture for Automatic Plant Phenotyping
Code for calibrating a camera using a pattern, exif tags, and then warping to physical dimensions * a scaling factor. Originally for use in plant phenotyping.
Code for taking measurements from images of an object on top of a calibration pattern.
Phenome 2020 Digital Phenotyping workshop materials
The official repository for the paper: Scalable learning for bridging the species gap in image-based plant phenotyping.
Greenotyper is a plant phenotyping tool used for detecting multiple plants on an image and measuring size and greenness of each individual plant over time.
A repository with notes from the seminar given on 28 November 2018.
Batch process FLIR radiometric (thermal) JPEGs and generate clean lossless images with consistent scale and palette
Detecting phenotypic traits such as leaf and collar count in soybean plants using deep learning
We present here a 1D convolutional neural network model to predict grain protein content using spectroscopic data of multiple cereals
Header-only C++11 library using OpenCV for high-throughput image-based plant phenotyping
Regression in Convolutional Neural Network applied to Plant Leaf Count
A comparison of classical and machine learning-based phenotype prediction methods on simulated data and three plant species
A versatile, fully open-source pipeline to extract phenotypic measurements from plant images
My Github Portfolio and CV
Plant Phenotyping APP
[ISPRS P&RS] Unsupervised shape-aware SOM down-sampling for plant point clouds
Plant phenotyping with image analysis
Modular, Scalable Phenomic Data Processing Pipelines
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