A Tool to Annotate and Prioritize Exome Variants
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Updated
May 3, 2024 - Java
A Tool to Annotate and Prioritize Exome Variants
Open Traits Network Registry and Website
An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/
Repository for the GA4GH phenopacket schema
API for linked biological knowledge
PATO - the Phenotype And Trait Ontology
Learn interpretable computational phenotyping models from k-merized genomic data
A phenotype-based tool for variant prioritization in WES and WGS data
Internationalisation of the HPO content
The phenogrid widget
Phenotype comparison tools using semantic similarity.
source files for OBA (Ontology of Biological Attributes)
Reference java implementation for phenopackets
Bayesian ontology querying from Bauer et al.
Fission Yeast Phenotype Ontology
R package for epigraphdb
Website for the Phenomics and Machine Learning Team
Ontology for phenotypes pertaining to the nematode Caenorhabditis elegans and related nematodes used by the nematode genome database WormBase
Germinate is an open source plant database infrastructure and application programming platform on which complex data from genetic resource collections can be stored, queried and visualized.
Python library for extracting HPO encoded phenotypes from text
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