Updated Reference Genome Sequence and Annotation of Mycobacterium bovis AF2122/97
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Updated
Jun 20, 2017 - Shell
Updated Reference Genome Sequence and Annotation of Mycobacterium bovis AF2122/97
Assembly of chloroplast genome using long-reads and short-reads for Genomics Course 2021 (MSc Bioinformatics for Computational Genomics)
A small example to test DENTIST's workflow
Elloreas, a genome assembler
Inter-sample analysis of SQANTI classifications
Tool to analyze chromatin accessibility with long read sequencing technologies
Snakemake workflow for SM-PATseq
TNTurnerLab Code for Revio Neuro-2a paper
NextITS pipeline documentation
openjdk:8 based release of CANU, a PacBio assembler
pattern detection in R using the stringR package for the pacbio and the oxford nanopore reads
a conda yaml for the genomehifi-contiguity analysis.
Variant Calling and Annotation using PacBio Hi-Fi Reads
Variant calling pipeline for Pacbio Hifi reads
Target site duplication assessment from alignment file and genomic location of insertion sites.
Neat AWS config, workflow, pipline
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