NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.
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Updated
Feb 18, 2024 - R
NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.
The ImageJ framework for quantification of neuronal anatomy
Fast Whole Brain Segmentation (Layers, codes and Pre-trained Models)
R package providing API access to the CATMAID web image annotation tool
Support functions for analysis of FAFB EM segmentation
R package implementing the NBLAST neuron search algorithm, as an add-on for the NeuroAnatomy Toolbox (nat) R package.
Support for working with light and electron microscopy fly brain data
Support for Drosophila bridging/mirroring registrations in R
R client utilities for interacting with the neuPrint connectome analysis service
Access to DVID API
Bridge HHMI Janelia MouseLight Database and nat R Package
Batteries included docker image for full natverse
Fast C++ functions for computational neuroanatomy
A R Shiny app for sharing and viewing lateral horn data
R package providing utility functions in support of NeuroAnatomy Toolbox (nat)
The Cx3D modeling framework in SciView and SNT
Interface Between NeuroAnatomy Toolbox and Amira Visualisation Software
Neuroanatomy Toolbox Support for Saalfeld/Bogovic HDF5 Registration Format
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