Official site of Biophys group at Unito
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Updated
May 24, 2024 - CSS
Official site of Biophys group at Unito
Functional Associations using Variational Autoencoders
R client for the OmniPath web service
A series of simulation codes used to emulate quantum-like networks in the simulation of emergent adaptive behavior, such as network synchronization, and relate the nature of the coupled harmonic oscillators with non-local behavior and chimera states in systems of quantum particles. Coding Used is based on mathematical modelling of transport in q…
Codebase for discovery of latent dynamic connectivity in brain cortical networks
A (soon to be) lightweight Python package for accessing single-cell connectome networks with metadata.
Spicing-aware time-course network enricher - exploratory analysis for transcriptomics and/or proteomics time series data
An environment for curating, validating, and exploring knowledge assemblies encoded in BEL
A Python package for drug discovery by analyzing causal paths on multiscale networks
Modeling heme pathogenicity and pathway dysregulation in the context of hemolytic disorders
`ggbipart`, an R package for plotting bipartite networks
Discovering sustainability in ecosystems
🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)
A multi-reference network annotation tool to support omics analysis
Determine an optimal modularity resolution for executing MolTI-DREAM, a community definition software for multilayer networks.
A Bio2BEL package for integrating pathway-related information from KEGG in BEL
Simulating and analyzing dynamical network models
Supplementary data 1 of the paper Mello et al. 2019 (NatureEcoEvo).
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