A Bio2BEL package for converting the Gene Ontology (GO) to BEL
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Updated
Mar 28, 2020 - Python
A Bio2BEL package for converting the Gene Ontology (GO) to BEL
LaTeX source for "Bio2BEL: Integration of Structured Knowledge with Biological Expression Language"
Discovering sustainability in ecosystems
Conversion of BEL to Agent Based Models
A PyBEL extension for interconversion with CX
Contextualization of protein-protein interaction databases by cell line
Dynamical analysis of minimnal networks based on approximate majority algorithm (AM)
A multi-reference network annotation tool to support omics analysis
Connecting nodes
A Bio2BEL package for converting ExPASy to BEL
A Bio2BEL package for the terminology from FlyBase (http://flybase.org/)
A Bio2BEL package for converting Entrez and HomoloGene to BEL
A Bio2BEL package for converting BMKS-react to BEL
A repository of the python code created for my undergraduate research project.
models and main code to reproduce the results of the research articule "single molecule switches and oscillators"
Codes and examples that are explored in the paper "Optimal strategy for determining flow-rates of ecosystem2models (at steady-state)." To be submitted Fall 2018
A Bio2BEL package for converting InterPro to BEL
Determine an optimal modularity resolution for executing MolTI-DREAM, a community definition software for multilayer networks.
Spicing-aware time-course network enricher - exploratory analysis for transcriptomics and/or proteomics time series data
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