ncbi-blast
Here are 33 public repositories matching this topic...
G-BLASTN is a GPU-accelerated nucleotide alignment tool based on the widely used NCBI-BLAST.
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Oct 20, 2022 - C++
Provides an user interface to BLAST on Tripal sites.
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Apr 1, 2024 - PHP
Assign taxonomy with blast, can be used for qiime
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Aug 18, 2023 - Python
Local NCBI BLAST+ Search
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Dec 2, 2020 - PHP
Django website project for common sequence search tools.
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Jan 13, 2023 - JavaScript
This module extends the Tripal Analysis Module and provides a method for loading XML results from the NCBI blast program. Blast results appear on each feature page.
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Dec 15, 2022 - PHP
Efficiently keep track of changes to genomes
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Feb 7, 2024 - Python
A PHP wrapper for NCBI BLAST URL API
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Sep 4, 2019 - PHP
Divide and Conquer BLAST: using grid engines to accelerate NCBI-BLAST+ and other sequence analysis tools
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Apr 26, 2020 - Perl
Targeted Probe Design Pipeline. Using mWGS genome bin clusters, prokka annotation predictions, and blast+ databases for generation, processing and filtering probe sequences.
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Nov 25, 2020 - Python
CPgeneProfiler R package repository
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Oct 19, 2020 - R
🌱 ➡️ 🌳 Add new taxa or taxonomic groups to the NCBI Taxdump files
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Mar 9, 2020 - Perl
Python and R Scripts for Statistical analysis of available immunogobulin variable genes
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Sep 4, 2018 - Python
This is a simple implementation of NCBI's BLAST(Basic Local Alignment Search Tool) url API in PHP. Blast finds regions of similarity between biological sequences.
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Jul 12, 2017 - PHP
This repository contains the Gene Reader App Codebase
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Sep 7, 2021 - Java
Targeted Probe Design Pipeline. Using mWGS genome bin clusters, prokka annotation predictions, and blast+ databases for generation, processing and filtering probe sequences.
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Nov 25, 2020 - Python
divide blast query and run all chunks across HPC or localhost in parallelly
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May 23, 2024 - Python
Interactive Visual Output and Functional Predictions visualisations for Job Dispatcher tool outputs
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Feb 16, 2023 - TypeScript
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