Read and write files from the BrainGlobe neuroanatomy suite
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Updated
Jun 4, 2024 - Python
Read and write files from the BrainGlobe neuroanatomy suite
Discover, install, and share napari plugins
This repository contains a collection of YML and/or requirments file and tricks to create Python Environments
Interface to the Bioformats Java library
Interactive visualization of spatial omics data
Linking napari layers with Matplotlib plots
Mother machine image analysis through napari
Interactively plot the image intensity along the depth axis of a 3D image dataset.
A large and somewhat ugly plugin for viewing and analysing hyperspectral data in Napari
Browse your OMERO database from within napari.
A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.
A Napari plugin to perform a simple particle tracking analysis for the Cavendish laboratory's Undergraduate Part II Particle Tracks experiment.
A napari plugin for clustering objects according to their properties.
StarDist plugin for napari
Feature extraction for labeled objects in images using regionprops from scikit-image
Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari
napari plugin for analyzing fluorescence-labeled proteins redistribution
napari-findaureus: A tool designed to identify bacteria in infected bone tissue images obtained via Confocal Laser Scanning Microscopy (CLSM).
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