ImageJ macros and scripts written at the imaging facility MRI
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Updated
May 21, 2024 - ImageJ Macro
ImageJ macros and scripts written at the imaging facility MRI
ImageJ functions and macros for working with thermal image files
ImageJ / Fiji macro to automatically export Leica LIF file as individual images (batch mode available)
A .NET microscopy imaging application based on Bio library. Supports various microscopes by using imported libraries & GUI automation. Supports XInput game controllers to move stage, take images, run ImageJ macros on images or Bio C# scripts.
Detection of straight line segments (rods) in noisy images
Code associated with The Digital Cell
Imagej macro to calculate the MTF based on a knife edge measurement
SMA is an ImageJ macro to automate the analysis of muscle architecture from B-mode ultrasound images.
The ImageJ Programming language IDE submodule for SNU Programming Tools (2D Mode) View the main project [here](https://github.com/SNU-Programming-Tools/)
an ImageJ toolset for EM image analysis
Splitting image to radial and non-radial components ImageJ macro
The MRI workshop about ImageJ macro programming.
Converts any image stack to a Stratovan Checkpoint file (*.ckpt) keeping specimen names and voxel sizes.
Automated detection and measurement of Proximity Ligation Assay foci in human cells nuclei.
Various tools for ImageJ / Fiji
Helper scripts and macros using BoneJ
A GUI-less version of Bio .NET library for editing & annotating various microscopy image formats. Supports all bioformats supported images. Integrates with ImageJ, running ImageJ filters & macro functions.
A repository containing ImageJ macros for the Snyder Lab
ImageJ macros to analyse microglial cells in live or fixed tissue (Work-in-progress)
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