Neuroimaging analysis and visualization suite
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Updated
Dec 4, 2023 - C++
Neuroimaging analysis and visualization suite
Run FreeSurfer commands within 3D Slicer
Data & Code for "The hidden identity of faces: A case of lifelong prosopagnosia"
Given a brain coordinate or cluster in MNI305 space, compute MNI152 and Talairach coordinates and find the closest brain regions.
Homepage for ShinySurfer
Software Tool for the Analysis and Visualization of MRI images of the brain
A header-only, no-dependency, C++11 library for accessing FreeSurfer neuroimaging file formats.
Docker image that provides a Ubuntu 16.04 (Xenial) with all CMP pre-requisite software installed
Python Library to Read and Write Surface Files in Freesurfer's TriangularSurface Format
Data from our own pre-processing of the ABIDE I sMRI dataset (1035 subjects) in FreeSurfer v6.
Shell scripts to run FreeSurfer's recon-all in parallel on multi-core machines.
A package to import FreeSurfer/SPM/FLS ROIs to BrainVoyager as VOIs/POIs.
Use `freesurfer` to process your imaging data, and get fancy viz in `blender`
Sphere2dice converts Cortical Brain Morphometry data from FreeSurfer or Gifty type into a stack of 2D images and saves is as numpy array. This stack of images is easier to use as input to conventional CNNs, while avoiding projection issues other methods suffer from.
Go module for reading and writing structural neuroimaging file formats. Supports FreeSurfer MGH, MGZ, and related formats.
This repository contains the scripts to perform the comparison between FreeSurfer and FastSurfer segmentations
A python module designed to reduce your brain load while accessing FreeSurfer brain surface and morphometry data files of single subjects and groups.
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