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Mar 28, 2019
fiji-macro
Here are 41 public repositories matching this topic...
A repository containing ImageJ macros for the Snyder Lab
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May 10, 2019 - Python
A simple ImageJ Fiji macro to apply maths to every nth slice in a single-channel image, e.g. average every 5 frames and similar.
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Jul 24, 2019
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Aug 4, 2020 - JavaScript
Calculates the colocalization of EVs.
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Sep 21, 2020
MRI ImageJ related python (jython) module.
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Sep 29, 2020 - Python
An ImageJ macro for 2D colocalization of IHC signals in ImageJ and counting RNAscope puncta within cells.
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Jan 25, 2021
Useful scripts for saving multichannel fluorescence images for use in figures and saving relevant metadata
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Jan 25, 2021
Image process framework to easily analyse fluorescent glioblastoma cells in pattern of neurons.
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Mar 24, 2021 - ImageJ Macro
A simple macro to analysis spheroid areas
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Apr 15, 2021 - ImageJ Macro
Python functions to run video analysis in Fiji. Reads output data from csv files and performs calculations in Python
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May 19, 2021
Prairie 2-Photon Microscopy Data Manager for recursive batch processing ans analysis with Fiji
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Jun 18, 2021 - ImageJ Macro
R-Scripts and Fiji-macro used for the construction of kymographs based on fluorescence profiles
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Jul 27, 2021 - R
ImageJ/Fiji macro to delete ROIs from image, ROI manager and Results table
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Sep 16, 2021
This is a full macro for images analysis, cell count and co-staining cell count. Different options are available to analyse your image. You can count co-staining cell in unlimited number of images. the counting is done by size. There is an option to batch image analysis to save some time. You can personnalize the code and the analysis to maximiz…
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Sep 22, 2021 - ImageJ Macro
ImageJ / Fiji macro to automatically export Leica LIF file as individual images (batch mode available)
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Feb 15, 2022 - ImageJ Macro
ImageJ macro for normalization of time lapse images against a reference image
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Nov 21, 2022 - ImageJ Macro
Fiji script for automated filopodia counting from single cell images.
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Jan 3, 2023 - ImageJ Macro
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