Alignment of biological sequences and primer designing
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Updated
Oct 11, 2018
Alignment of biological sequences and primer designing
The set of scripts to obtain GRCh38/hg38 exons genome track
Deep neural network for splice sites prediction
Testing of mutual exclussion between pairs of exons of NMD
GTF/GFF per gene non-overlapping exon length calculator
Get exons from a transcriptome and raw genomic reads using abyss-bloom and bedtools
A tool to find genes of user specific exon number
Public repo for the recount Bioconductor workflow that is visible at http://bioconductor.org/help/workflows/
This is a package that provide tools to extract different genome architecture features, build taxonomy lineage and test features against certain value in taxonomy rank in fully automated pipeline.
RNAmotifs is an integrated R, C++, python softwares that evaluates the sequence around differentially regulated alternative exons to identify clusters of short sequences, referred to as multivalent RNA motifs, bound by RNA-binding proteins
Use Thor's Axe to cut exons into their evolutionary building blocks ⚡
Finding putative exons and constructing splicegraphs using Trans-ABySS contigs
R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
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