cell-counting
Here are 24 public repositories matching this topic...
A simple ImageJ Macro to count the cells of multiple images.
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May 17, 2021 - ImageJ Macro
This repository is dedicated to the AIBI 2019/2020 project. This project's objective is to automate cell counting in microscopy images.
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Oct 17, 2023 - MATLAB
count lipid droplets in tetrahymena with Python
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Apr 30, 2024 - Python
Plugins for ImageJ/FIJI
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Nov 2, 2019 - Python
A short workshop for Matlab
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Apr 4, 2019 - MATLAB
Non invasive live cell cycle monitoring using a supervised deep neural autoencoder onquantitative phase images
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Jun 25, 2021 - Python
A demonstration script for analyzing cell density in whole slide images (WSIs). This repository accompanies the article published on daangeijs.nl. The demo showcases how to compute cell density in detected tumor regions using WholeSlideData and GeoPandas.
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Sep 28, 2023 - Jupyter Notebook
An immunohistochemistry cell-counting (quantifying) neural network (CSRNet PyTorch) that was trained on KRT14, KRT5, and Ki67 stains (and of course DAPI).
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Jul 31, 2023 - Jupyter Notebook
Cell image analysis pipeline for RPE cell identification, counting and maturity classification
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Apr 21, 2024 - Python
Region-based Fitting of Overlapping Ellipses (original implementation by C. Panagiotakis and A.A. Argyros, Image Vis Comput 2020)
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Feb 15, 2024 - MATLAB
Medical Image processing and segmentation for the automatic detection and counting of blood platelets and WBCs.
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Jul 10, 2019 - Python
SuperDSM is a globally optimal segmentation method based on superadditivity and deformable shape models for cell nuclei in fluorescence microscopy images and beyond.
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Apr 23, 2024 - Python
Semi-automated script for detection and quantification of c-Fos cells in IHC stained confocal stack images
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Nov 2, 2022 - Python
braincellcount: count cells in mouse brains
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Jun 12, 2020 - Python
Efficient point process inference for large scale object detection
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Apr 3, 2018 - MATLAB
Analysis and characterisation of cells within the gut wall using deep learning models. The current focus is on studying enteric neurons and enteric glia.
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May 22, 2024 - ImageJ Macro
The code of paper: Lite-UNet: A Lightweight and Efficient Network for Cell Localization
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Oct 5, 2023
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