Software for intuitively doing Differential Gene Expression (DGE) analysis on Windows and GNU\Linux, based on R packages.
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Updated
Oct 15, 2019 - Java
Software for intuitively doing Differential Gene Expression (DGE) analysis on Windows and GNU\Linux, based on R packages.
AllMine, a flexible pipeline for Allele Mining. Develloped at INRA's GAFL unit :
a comprehensive software package with graphical user interface for single-cell RNA sequencing analysis.
Align SARS-CoV-2 sequences against a reference genome, and trim UTR sequences
Identify and characterize repeat expansions in long read data
CutNtag pipeline for Pasini's lab written in snakemake
Pipeline to make pairwise comparisons of matched fasta sequences.
main Repository for my Master's Thesis work
Snakemake pipeline for meta-analysis of functional screening data
Grafting plays a pivotal role in modern agriculture, providing myriad benefits for both farmers and plants
HMMER-based microcin search using full microcin sequences and double-glycine signal region.
scRNA sequence classification by a 3-layer-MLP. Weighted samples and sigmoid cross entropy loss were used.
Antibiotic Resistance in Metagenomes
Pipeline for analysing M. tuberculosis nanopore reads and getting drug susceptibility information.
QC and tidying on assembled genomes.
A snakemake workflow wrapping various phage host prediction tools
Virus detection in Cassava BioProjects
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