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inconsistencies in population size showing in the latest tutorial #39

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biozzq opened this issue May 18, 2021 · 1 comment
Open

inconsistencies in population size showing in the latest tutorial #39

biozzq opened this issue May 18, 2021 · 1 comment

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@biozzq
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biozzq commented May 18, 2021

Dear @stschiff

The factor 2 will cause the inconsistencies when plotting effective population size. And this has been disscussed here stschiff/msmc2#17 (comment). You should also update the Ne plot in the latest tutorial. Thank you very much.

lines(afrDat$left_time_boundary/mu*gen, (1/afrDat$lambda)/(2*mu), type="s", col="red")

Sincerely,
Zheng zhuqing

@stschiff
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OK, I haven't touched the tutorial for a long time, but you're right, I should revisit it and update all the necessary plots. It's not super high on my todo list, but it's noted.

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