run-tests-action.yaml

name: pytest
on: push
jobs:
  run_pytest:
    name: run-tests (${{ matrix.python-version }}, ${{ matrix.os }})
    runs-on: ${{ matrix.os }}
    defaults:
      run:
        shell: bash -l {0}
    strategy:
      fail-fast: false
      matrix:
        python-version: ["3.7","3.8","3.9", "3.10", "3.11"]
        os: ["ubuntu-latest"]
    steps:
      - name: Check out repository code
        uses: actions/checkout@v3
      - name: Install Conda environment with Micromamba
        uses: mamba-org/provision-with-micromamba@main
        with:
          environment-file: tests/test-env.yml
          extra-specs: |
            python=${{ matrix.python-version }}
          channels: phygbu, conda-forge
          channel-priority: flexible
      - name: Conda info
        run: ${MAMBA_EXE} info
      - name: Conda list
        run: ${MAMBA_EXE} list
      - name: install package
        run: ${MAMBA_ROOT_PREFIX}/envs/test-environment/bin/pip install --no-deps .
      - name: Install headless server
        run: |
           sudo apt-get install xvfb
           sudo apt-get install qtbase5-dev
      - name: Test with xvfb
        run: xvfb-run --auto-servernum ${MAMBA_ROOT_PREFIX}/envs/test-environment/bin/pytest  --cov-report=xml:cov.xml --cov=Stoner --junitxml pytest.xml
        env:
            TZ: Europe/London
            LC_CTYPE: en_GB.UTF-8
            GH_ACTION: True
      - name: Cleanup X11 server
        uses: bcomnes/cleanup-xvfb@v1
      - name: Run Coveralls
        uses: AndreMiras/coveralls-python-action@v20201129
        with:
          parallel: true
          flag-name: python-${{ matrix.python-version }}
          github-token: ${{ secrets.GITHUB_TOKEN }}
      - name: Upload Unit Test Results
        if: always()
        uses: actions/upload-artifact@v2
        with:
          name: Unit Test Results (Python ${{ matrix.python-version }})
          path: pytest.xml
      - name: Post Coveraage result to Codacy
        run: |
          export CODACY_PROJECT_TOKEN=${{ secrets.CODACY_PROJECT_TOKEN }}
          bash <(curl -Ls https://coverage.codacy.com/get.sh) report -r cov.xml

  publish-test-results:
    name: "Publish Unit Tests Results"
    needs: run_pytest
    runs-on: ubuntu-latest
    if: always()

    steps:
      - name: Download Artifacts
        uses: actions/download-artifact@v2
        with:
          path: artifacts

      - name: Publish Unit Test Results
        uses: EnricoMi/publish-unit-test-result-action@v1
        with:
          files: artifacts/**/*.xml

  coverage-finish:
    needs: run_pytest
    runs-on: ubuntu-latest
    steps:
      - name: Finish colveralls
        uses: AndreMiras/coveralls-python-action@v20201129
        with:
          parallel-finished: true