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Easy search: how do I output both sequence similarity and structure-sequence/3Di similarity? #230

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danny305 opened this issue Jan 12, 2024 · 1 comment

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@danny305
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When you run easy search and output the pident/fident columns, is this sequence similarity (what you would get from mmseqs2/blast) or structure-sequence similarity (using the 3Di)?

Also, how can I output both sequence and structure-sequence similarity?

Thank you!!

Danny

@martin-steinegger
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It is the amino acid similarity. Currently, we do not support to print out both.

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