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In applying AdaptiveGraphLasso to some new data, I see a lot of these warnings
/share/sw/free/anaconda/4.2.0/python3.5/lib/python3.5/site-packages/
numpy/linalg/linalg.py:1757:
RuntimeWarning: invalid value encountered in slogdet
sign, logdet = _umath_linalg.slogdet(a, signature=signature)
/path/to/home/.local/lib/python3.5/site-packages/skggm-0.2.6-py3.5-linux-x86_64.egg/inverse_covariance/metrics.py:25:
RuntimeWarning: invalid value encountered in multiply
fast_logdet(precision) - dim * np.log(2 * np.pi)
/path/to/home/.local/lib/python3.5/site-packages/
skggm-0.2.6-py3.5-linux-x86_64.egg/inverse_covariance/metrics.py:116:
RuntimeWarning: invalid value encountered in greater
mask = np.abs(precision.flat) > np.finfo(precision.dtype).eps
/path/to/home/.local/lib/python3.5/site-packages/
skggm-0.2.6-py3.5-linux-x86_64.egg/inverse_covariance/metrics.py:113:
RuntimeWarning: invalid value encountered in multiply
l_theta = -np.sum(covariance * precision) + fast_logdet(precision)
/path/to/home/.local/lib/python3.5/site-packages/
skggm-0.2.6-py3.5-linux-x86_64.egg/inverse_covariance/metrics.py:114:
RuntimeWarning: overflow encountered in double_scalars
l_theta *= n_features / 2.
/path/to/home/.local/lib/python3.5/site-packages/
skggm-0.2.6-py3.5-linux-x86_64.egg/inverse_covariance/inverse_covariance.py:331:
RuntimeWarning: invalid value encountered in less
min_indices = np.where(np.abs(ebic_scores - ebic_scores.min()) < 1e-10)
File "/path/to/home/.local/lib/python3.5/site-packages/
skggm-0.2.6-py3.5-linux-x86_64.egg/inverse_covariance/quic_graph_lasso.py", line 888, in fit
best_lam_idx = self.ebic_select(gamma=self.gamma)
File "/path/to/home/.local/lib/python3.5/site-packages/
skggm-0.2.6-py3.5-linux-x86_64.egg/inverse_covariance/inverse_covariance.py", line 332, in ebic_select
return np.max(min_indices)
File "/share/sw/free/anaconda/4.2.0/python3.5/lib/python3.5/
site-packages/numpy/core/fromnumeric.py", line 2252, in amax
out=out, **kwargs)
File "/share/sw/free/anaconda/4.2.0/python3.5/lib/python3.5/
site-packages/numpy/core/_methods.py", line 26, in _amax
return umr_maximum(a, axis, None, out, keepdims)
ValueError: zero-size array to reduction operation maximum which has no identity
Encountered this when using latest develop branch, e16ff8c4d10
and calling skggm with python3.5
The text was updated successfully, but these errors were encountered:
In applying AdaptiveGraphLasso to some new data, I see a lot of these warnings
Encountered this when using latest develop branch, e16ff8c4d10
and calling skggm with python3.5
The text was updated successfully, but these errors were encountered: