NAMESPACE

# Generated by roxygen2: do not edit by hand

export("catchability<-")
export("ext_encounter<-")
export("ext_mort<-")
export("gear_params<-")
export("given_species_params<-")
export("initialN<-")
export("initialNOther<-")
export("initialNResource<-")
export("initial_effort<-")
export("intake_max<-")
export("interaction_matrix<-")
export("maturity<-")
export("metab<-")
export("other_params<-")
export("pred_kernel<-")
export("repro_prop<-")
export("resource_capacity<-")
export("resource_dynamics<-")
export("resource_level<-")
export("resource_params<-")
export("resource_rate<-")
export("search_vol<-")
export("selectivity<-")
export("species_params<-")
export(BevertonHoltRDD)
export(MizerParams)
export(MizerSim)
export(N)
export(NOther)
export(NResource)
export(RickerRDD)
export(SheperdRDD)
export(addSpecies)
export(age_mat)
export(animateSpectra)
export(balance_resource_logistic)
export(balance_resource_semichemostat)
export(box_pred_kernel)
export(calc_selectivity)
export(calculated_species_params)
export(calibrateBiomass)
export(calibrateNumber)
export(calibrateYield)
export(catchability)
export(compareParams)
export(completeSpeciesParams)
export(constantEggRDI)
export(constantRDD)
export(constant_other)
export(customFunction)
export(default_pred_kernel_params)
export(defaults_edition)
export(distanceMaxRelRDI)
export(distanceSSLogN)
export(double_sigmoid_length)
export(dw)
export(dw_full)
export(emptyParams)
export(ext_encounter)
export(ext_mort)
export(finalN)
export(finalNOther)
export(finalNResource)
export(gear_params)
export(getBiomass)
export(getCatchability)
export(getColours)
export(getCommunitySlope)
export(getComponent)
export(getCriticalFeedingLevel)
export(getDiet)
export(getEGrowth)
export(getERepro)
export(getEReproAndGrowth)
export(getESpawning)
export(getEffort)
export(getEncounter)
export(getExtEncounter)
export(getExtMort)
export(getFMort)
export(getFMortGear)
export(getFeedingLevel)
export(getGrowthCurves)
export(getInitialEffort)
export(getInteraction)
export(getLinetypes)
export(getM2)
export(getM2Background)
export(getMaturityProportion)
export(getMaxIntakeRate)
export(getMeanMaxWeight)
export(getMeanWeight)
export(getMetabolicRate)
export(getMetadata)
export(getMort)
export(getN)
export(getParams)
export(getPhiPrey)
export(getPredKernel)
export(getPredMort)
export(getPredRate)
export(getProportionOfLargeFish)
export(getRDD)
export(getRDI)
export(getRateFunction)
export(getRates)
export(getReproductionLevel)
export(getReproductionProportion)
export(getResourceCapacity)
export(getResourceDynamics)
export(getResourceLevel)
export(getResourceMort)
export(getResourceRate)
export(getSSB)
export(getSearchVolume)
export(getSelectivity)
export(getTimes)
export(getYield)
export(getYieldGear)
export(getZ)
export(get_f0_default)
export(get_gamma_default)
export(get_h_default)
export(get_initial_n)
export(get_ks_default)
export(get_phi)
export(get_size_range_array)
export(get_time_elements)
export(given_species_params)
export(idxFinalT)
export(initialN)
export(initialNOther)
export(initialNResource)
export(initial_effort)
export(intake_max)
export(interaction_matrix)
export(knife_edge)
export(l2w)
export(log_breaks)
export(lognormal_pred_kernel)
export(matchBiomasses)
export(matchGrowth)
export(matchNumbers)
export(matchYields)
export(maturity)
export(melt)
export(metab)
export(mizerEGrowth)
export(mizerERepro)
export(mizerEReproAndGrowth)
export(mizerEncounter)
export(mizerFMort)
export(mizerFMortGear)
export(mizerFeedingLevel)
export(mizerMort)
export(mizerPredMort)
export(mizerPredRate)
export(mizerRDI)
export(mizerRates)
export(mizerResourceMort)
export(newCommunityParams)
export(newMultispeciesParams)
export(newSingleSpeciesParams)
export(newTraitParams)
export(noRDD)
export(other_params)
export(plotBiomass)
export(plotBiomassObservedVsModel)
export(plotDataFrame)
export(plotDiet)
export(plotFMort)
export(plotFeedingLevel)
export(plotGrowthCurves)
export(plotM2)
export(plotPredMort)
export(plotSpectra)
export(plotYield)
export(plotYieldGear)
export(plotYieldObservedVsModel)
export(plotlyBiomass)
export(plotlyBiomassObservedVsModel)
export(plotlyFMort)
export(plotlyFeedingLevel)
export(plotlyGrowthCurves)
export(plotlyPredMort)
export(plotlySpectra)
export(plotlyYield)
export(plotlyYieldGear)
export(plotlyYieldObservedVsModel)
export(power_law_pred_kernel)
export(pred_kernel)
export(project)
export(projectToSteady)
export(project_simple)
export(readParams)
export(removeComponent)
export(removeSpecies)
export(renameSpecies)
export(repro_prop)
export(resource_capacity)
export(resource_constant)
export(resource_dynamics)
export(resource_level)
export(resource_logistic)
export(resource_params)
export(resource_rate)
export(resource_semichemostat)
export(saveParams)
export(scaleModel)
export(search_vol)
export(selectivity)
export(setBevertonHolt)
export(setColours)
export(setComponent)
export(setExtEncounter)
export(setExtMort)
export(setFishing)
export(setInitialValues)
export(setInteraction)
export(setLinetypes)
export(setMaxIntakeRate)
export(setMetabolicRate)
export(setMetadata)
export(setParams)
export(setPredKernel)
export(setRateFunction)
export(setReproduction)
export(setResource)
export(setRmax)
export(setSearchVolume)
export(set_community_model)
export(set_multispecies_model)
export(set_species_param_default)
export(set_trait_model)
export(sigmoid_length)
export(sigmoid_weight)
export(species_params)
export(steady)
export(steadySingleSpecies)
export(truncated_lognormal_pred_kernel)
export(upgradeParams)
export(upgradeSim)
export(validEffortVector)
export(validGearParams)
export(validParams)
export(validSpeciesParams)
export(valid_species_arg)
export(w)
export(w2l)
export(w_full)
exportClasses(MizerParams)
exportClasses(MizerSim)
exportMethods(plot)
exportMethods(summary)
import(assertthat)
import(dplyr)
import(ggplot2)
import(methods)
importFrom(Rcpp,sourceCpp)
importFrom(grDevices,col2rgb)
importFrom(lifecycle,deprecated)
importFrom(plotly,ggplotly)
importFrom(plotly,plotlyOutput)
importFrom(plotly,renderPlotly)
importFrom(reshape2,melt)
importFrom(rlang,cnd_muffle)
importFrom(rlang,signal)
importFrom(stats,complete.cases)
importFrom(stats,cor.test)
importFrom(stats,fft)
importFrom(stats,lm)
importFrom(stats,mvfft)
importFrom(stats,pnorm)
importFrom(stats,runif)
importFrom(utils,data)
importFrom(utils,globalVariables)
importFrom(utils,modifyList)
importFrom(utils,packageVersion)
useDynLib(mizer)