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Shared Motif for Clusters after Phenograph clustering #69

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jkbenotmane opened this issue May 11, 2022 · 0 comments
Open

Shared Motif for Clusters after Phenograph clustering #69

jkbenotmane opened this issue May 11, 2022 · 0 comments

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@jkbenotmane
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Hello Mr. Sidhom,
thank you for creating DeepTCR! I am using the supervised Sequence Classifier, including HLA Supertypes for Samples from different Patients and Treatments. My Question now is: Is it possible to extract shared Motifs for each Cluster that are common?
As DTCRSS.Representative_Sequences() as well as DTCR_SS.Motif_Identification() do extract explicitly the Sample specific Motifs if I understood correctly ?
Thank you in Advance for your help!

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