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Seurat v4.1.1

Test environments

  • local Ubuntu 20.04 install, R 4.1.3
  • Ubuntu 16.04.6 (on travis-ci), R 4.0.0, R devel
  • macOS 10.13.6 (on travis-ci), R 4.0.2
  • Windows Server 2012 R2 (on AppVeyor), R 4.1.0 Patched
  • win-builder (release, devel)

R CMD check results

There were no ERRORs or WARNINGs

There was one NOTE:

Found the following (possibly) invalid URLs: URL: https://www.science.org/doi/abs/10.1126/science.aad0501 From: man/cc.genes.Rd man/cc.genes.updated.2019.Rd Status: 503 Message: Service Unavailable

This URL is valid and the service still exists. When navigating to the URL either via the documentation or directly, you are taken to the correct article

Downstream dependencies

There no packages that depend on Seurat

There are sixteen packages that import Seurat: CAMML, CIDER, DR.SC, DUBStepR, maple, Platypus, rPanglaoDB, scDiffCom, scMappR, SCRIP, scRNAstat, Signac, SignacX, SoupX, spruce, and tidyseurat; this update does not impact their functionality

There are twelve packages that suggest Seurat: BisqueRNA, CIARA, ClustAssess, clustree, conos, DIscBIO, dyngen, harmony, rliger, Rmagic, treefit, and VAM; this update does not impact their functionality.