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README.Rmd
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README.Rmd
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---
output: github_document
---
<!-- README.md is generated from README.Rmd. Please edit that file -->
```{r, include = FALSE}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
fig.path = "man/figures/README-",
out.width = "100%"
)
```
# AnlysisOfWaves
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The goal of AnlysisOfWaves is to easily reproduce the analysis of Ca2+ waves in the publication ...
## Installation
This package is only available in this git repository.
You can install it from [GitHub](https://github.com/) with:
``` r
# install.packages("devtools")
devtools::install_github("rjlopez2/AnlysisOfWaves")
```
## Example
This is a basic example which shows you how plot the cumulative occurrence of Ca2+ waves obtained from linescan images:
```{r example, out.width = "600px"}
library(AnlysisOfWaves)
wave_or_EAP_threshold <- 10 # Set time for highlighting the relative wave occurrence.
df_waves_intact_cells %>%
my_cum_occu_wave_plot_func(reffer_wave_thres = wave_or_EAP_threshold,
my_var = "Wave_latency",
base_size = 28, line_size = 2)
```